RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 OR4C12Q96R67 309 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 SFXN3Q9BWM7 321 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 BCL2L14Q9BZR8 327 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 RBKSQ9H477 322 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 AKIRIN1Q9H9L7 192 aaPredicted RBP4.88□□□□□ -1.63
VPS41-214ENST00000490924 OBP2BQ9NPH6 170 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 DEPPQ9NTK1 212 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 AURKAIP1Q9NWT8 199 aaPredicted RBP4.88□□□□□ -1.63
VPS41-214ENST00000490924 KLF13Q9Y2Y9 288 aaPredicted RBP4.88□□□□□ -1.63
VPS41-214ENST00000490924 MYO7BQ6PIF6 2116 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 MYO9BQ13459 2157 aa4.88□□□□□ -1.63
VPS41-214ENST00000490924 A0A0G2JMM0 328 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 A0A1W2PPB8 328 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 A0A1W2PRS3 328 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 ZFP92A6NM28 416 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 CEBPZOSA8MTT3 80 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 KIR3DP1A8MWS1 328 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 C9JCJ5 164 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 SYNGR1O43759 233 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 OR2H2O95918 312 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 MYF5P13349 255 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 IL2RGP31785 369 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 OPRK1P41145 380 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 TNFSF10P50591 281 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 SOX8P57073 446 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 TAS2R60P59551 318 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 UBE2NP61088 152 aaKnown RBP4.87□□□□□ -1.63
VPS41-214ENST00000490924 YPEL3P61236 119 aaPredicted RBP4.87□□□□□ -1.63
VPS41-214ENST00000490924 RPL23P62829 140 aaKnown RBP4.87□□□□□ -1.63
VPS41-214ENST00000490924 ARL16Q0P5N6 197 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 Q0VFX4 171 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 OR1C1Q15619 314 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 RTL8BQ17RB0 113 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 DMRTC1Q5HYR2 192 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 ZNF343Q6P1L6 599 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 INO80CQ6PI98 192 aaPredicted RBP4.87□□□□□ -1.63
VPS41-214ENST00000490924 TIPARPQ7Z3E1 657 aaKnown RBP4.87□□□□□ -1.63
VPS41-214ENST00000490924 TMEM144Q7Z5S9 345 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.87□□□□□ -1.63
VPS41-214ENST00000490924 MCEMP1Q8IX19 187 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 DRAM1Q8N682 238 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 ZNF383Q8NA42 475 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.87□□□□□ -1.63
VPS41-214ENST00000490924 OR2T10Q8NGZ9 312 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 OR4X1Q8NH49 305 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 GALMQ96C23 342 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 C14orf144Q96I85 54 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 RSG1Q9BU20 258 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 NDUFAF3Q9BU61 184 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 C19orf24Q9BVV8 132 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 NPCDR1Q9BY65 106 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 GPR61Q9BZJ8 451 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 OR51B6Q9H340 312 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 OR6C3Q9NZP0 311 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 WASF3Q9UPY6 502 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 WDR83OSQ9Y284 106 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 CEP192Q8TEP8 1941 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 ABCA7Q8IZY2 2146 aa4.87□□□□□ -1.63
VPS41-214ENST00000490924 TRGV8A0A0C4DH27 118 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 A8MWP6 167 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 KLRC4-KLRK1H3BQV0 150 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 M0QZK8 103 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 CDIPTO14735 213 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 SLC31A2O15432 143 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 TRAPPC6AO75865 159 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 CLDN1O95832 211 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 IL18BPO95998 194 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 MT-CO2P00403 227 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 CRYABP02511 175 aaKnown RBP4.86□□□□□ -1.63
VPS41-214ENST00000490924 AMBPP02760 352 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 PATE4P0C8F1 98 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 GZMBP10144 247 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 CCL4P13236 92 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 FABP4P15090 132 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 AREGP15514 252 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 KITLGP21583 273 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 WNT5AP41221 380 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 GALR1P47211 349 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 ASCL1P50553 236 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 SPCS3P61009 180 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 SELENOTP62341 195 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 PAFAH1B2P68402 229 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 TMEM267Q0VDI3 215 aaPredicted RBP4.86□□□□□ -1.63
VPS41-214ENST00000490924 LCN15Q6UWW0 184 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 TUSC5Q8IXB3 177 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 PNKDQ8N490 385 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 C17orf78Q8N4C9 275 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 STPG3Q8N7X2 389 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 OR10G9Q8NGN4 311 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 OR10G7Q8NGN6 311 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 DTD1Q8TEA8 209 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 CT55Q8WUE5 264 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 CORO2AQ92828 525 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 NINJ1Q92982 152 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 C11orf52Q96A22 123 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 S100PBPQ96BU1 408 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 TTTY12Q9BZ98 90 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 PRRG4Q9BZD6 226 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 PARLQ9H300 379 aa4.86□□□□□ -1.63
VPS41-214ENST00000490924 TRAPPC2LQ9UL33 140 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms