RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 TRIM77I1YAP6 450 aa12.77□□□□□ -0.37
PCCB-218ENST00000490504 ST8SIA5O15466 376 aa12.77□□□□□ -0.37
PCCB-218ENST00000490504 VDAC1P21796 283 aa12.77□□□□□ -0.37
PCCB-218ENST00000490504 OMGP23515 440 aa12.77□□□□□ -0.37
PCCB-218ENST00000490504 AP2S1P53680 142 aaPredicted RBP12.77□□□□□ -0.37
PCCB-218ENST00000490504 RPL31P62899 125 aaKnown RBP12.77□□□□□ -0.37
PCCB-218ENST00000490504 CATR1Q13166 79 aa12.77□□□□□ -0.37
PCCB-218ENST00000490504 TUSC1Q2TAM9 212 aa12.77□□□□□ -0.37
PCCB-218ENST00000490504 SIGLECL1Q8N7X8 197 aa12.77□□□□□ -0.37
PCCB-218ENST00000490504 C5orf30Q96GV9 206 aa12.77□□□□□ -0.37
PCCB-218ENST00000490504 JMJD8Q96S16 334 aa12.77□□□□□ -0.37
PCCB-218ENST00000490504 AGMATQ9BSE5 352 aa12.77□□□□□ -0.37
PCCB-218ENST00000490504 IDI2-AS1Q9NZ38 188 aa12.77□□□□□ -0.37
PCCB-218ENST00000490504 SCGB1D2O95969 90 aa12.76□□□□□ -0.37
PCCB-218ENST00000490504 RLN2P04090 185 aa12.76□□□□□ -0.37
PCCB-218ENST00000490504 IGHV4-38-2P0DP08 117 aa12.76□□□□□ -0.37
PCCB-218ENST00000490504 NUP62P37198 522 aaPredicted RBP12.76□□□□□ -0.37
PCCB-218ENST00000490504 GPR12P47775 334 aa12.76□□□□□ -0.37
PCCB-218ENST00000490504 NMSQ5H8A3 153 aa12.76□□□□□ -0.37
PCCB-218ENST00000490504 OR52M1Q8NGK5 317 aa12.76□□□□□ -0.37
PCCB-218ENST00000490504 OR4D5Q8NGN0 318 aa12.76□□□□□ -0.37
PCCB-218ENST00000490504 OR1S1Q8NH92 325 aa12.76□□□□□ -0.37
PCCB-218ENST00000490504 ABHD14BQ96IU4 210 aa12.76□□□□□ -0.37
PCCB-218ENST00000490504 GAL3ST2Q9H3Q3 398 aa12.76□□□□□ -0.37
PCCB-218ENST00000490504 C19orf12Q9NSK7 152 aa12.76□□□□□ -0.37
PCCB-218ENST00000490504 SDHAF2Q9NX18 166 aa12.76□□□□□ -0.37
PCCB-218ENST00000490504 SOX21Q9Y651 276 aaPredicted RBP12.76□□□□□ -0.37
PCCB-218ENST00000490504 DVL1O14640 695 aa12.75□□□□□ -0.37
PCCB-218ENST00000490504 DEDDO75618 318 aa12.75□□□□□ -0.37
PCCB-218ENST00000490504 FCN3O75636 299 aa12.75□□□□□ -0.37
PCCB-218ENST00000490504 MBPP02686 304 aaPredicted RBP12.75□□□□□ -0.37
PCCB-218ENST00000490504 PPIAL4GP0DN37 164 aa12.75□□□□□ -0.37
PCCB-218ENST00000490504 RAB7AP51149 207 aa12.75□□□□□ -0.37
PCCB-218ENST00000490504 Q3ZCU0 254 aa12.75□□□□□ -0.37
PCCB-218ENST00000490504 THOC7Q6I9Y2 204 aaKnown RBP12.75□□□□□ -0.37
PCCB-218ENST00000490504 ZNF66Q6ZN08 573 aa12.75□□□□□ -0.37
PCCB-218ENST00000490504 FOXRED2Q8IWF2 684 aa12.75□□□□□ -0.37
PCCB-218ENST00000490504 TCTEX1D1Q8N7M0 179 aa12.75□□□□□ -0.37
PCCB-218ENST00000490504 ZNF680Q8NEM1 530 aa12.75□□□□□ -0.37
PCCB-218ENST00000490504 OR10A7Q8NGE5 316 aa12.75□□□□□ -0.37
PCCB-218ENST00000490504 ZNF48Q96MX3 618 aaPredicted RBP12.75□□□□□ -0.37
PCCB-218ENST00000490504 HSD17B10Q99714 261 aaKnown RBP12.75□□□□□ -0.37
PCCB-218ENST00000490504 LSM5Q9Y4Y9 91 aaKnown RBP12.75□□□□□ -0.37
PCCB-218ENST00000490504 KANTRA0A1W2PQU2 76 aa12.74□□□□□ -0.37
PCCB-218ENST00000490504 BCL2L11O43521 198 aa12.74□□□□□ -0.37
PCCB-218ENST00000490504 IFNA7P01567 189 aa12.74□□□□□ -0.37
PCCB-218ENST00000490504 NDUFA5Q16718 116 aa12.74□□□□□ -0.37
PCCB-218ENST00000490504 ZNF585BQ52M93 769 aa12.74□□□□□ -0.37
PCCB-218ENST00000490504 FAM219AQ8IW50 185 aa12.74□□□□□ -0.37
PCCB-218ENST00000490504 H1FXQ92522 213 aaKnown RBP12.74□□□□□ -0.37
PCCB-218ENST00000490504 LSM10Q969L4 123 aaKnown RBP12.74□□□□□ -0.37
PCCB-218ENST00000490504 ABHD14AQ9BUJ0 271 aa12.74□□□□□ -0.37
PCCB-218ENST00000490504 FAM212BQ9NTI7 297 aaPredicted RBP12.74□□□□□ -0.37
PCCB-218ENST00000490504 DOCK11Q5JSL3 2073 aa12.74□□□□□ -0.37
PCCB-218ENST00000490504 K7EPK0 472 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 IGKV1-39P01597 117 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 IGKV1D-39P04432 117 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 SLC25A6P12236 298 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 RPL30P62888 115 aaKnown RBP12.73□□□□□ -0.37
PCCB-218ENST00000490504 UBA52P62987 128 aaKnown RBP12.73□□□□□ -0.37
PCCB-218ENST00000490504 ZNF273Q14593 569 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 PRAMEF5Q5TYX0 476 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 C12orf54Q6X4T0 127 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 SLC51BQ86UW2 128 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 FAM71E2Q8N5Q1 922 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 RNASE11Q8TAA1 199 aaKnown RBP12.73□□□□□ -0.37
PCCB-218ENST00000490504 TCTEX1D2Q8WW35 142 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 RRNAD1Q96FB5 475 aaKnown RBP12.73□□□□□ -0.37
PCCB-218ENST00000490504 ZNF714Q96N38 554 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 AQP10Q96PS8 301 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 DUX5Q96PT3 197 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 MS4A7Q9GZW8 240 aaPredicted RBP12.73□□□□□ -0.37
PCCB-218ENST00000490504 IFI27L2Q9H2X8 130 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 RPUSD1Q9UJJ7 312 aaKnown RBP12.73□□□□□ -0.37
PCCB-218ENST00000490504 POMT1Q9Y6A1 747 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 TENM1Q9UKZ4 2725 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 TMEM89A2RUT3 159 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 E5RGE8 158 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 ST8SIA3O43173 380 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 ENSAO43768 121 aaKnown RBP12.73□□□□□ -0.37
PCCB-218ENST00000490504 NFYBP25208 207 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 ZNF134P52741 427 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 TMEM200BQ69YZ2 307 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 RBMS3Q6XE24 437 aaKnown RBP12.73□□□□□ -0.37
PCCB-218ENST00000490504 GAB2Q9UQC2 676 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 NSG2Q9Y328 171 aa12.73□□□□□ -0.37
PCCB-218ENST00000490504 TRBV23-1A0A0A0MS06 115 aa12.72□□□□□ -0.37
PCCB-218ENST00000490504 TRAV40A0A0B4J280 105 aa12.72□□□□□ -0.37
PCCB-218ENST00000490504 A0A1B0GU03 582 aa12.72□□□□□ -0.37
PCCB-218ENST00000490504 HAX1O00165 279 aa12.72□□□□□ -0.37
PCCB-218ENST00000490504 SLC31A2O15432 143 aa12.72□□□□□ -0.37
PCCB-218ENST00000490504 KCNAB3O43448 404 aa12.72□□□□□ -0.37
PCCB-218ENST00000490504 CFDP00746 253 aaPredicted RBP12.72□□□□□ -0.37
PCCB-218ENST00000490504 LPAR6P43657 344 aa12.72□□□□□ -0.37
PCCB-218ENST00000490504 NKX2-1P43699 371 aaPredicted RBP12.72□□□□□ -0.37
PCCB-218ENST00000490504 EXOSC2Q13868 293 aaKnown RBP12.72□□□□□ -0.37
PCCB-218ENST00000490504 CT45A1Q5HYN5 189 aa12.72□□□□□ -0.37
PCCB-218ENST00000490504 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.72□□□□□ -0.37
PCCB-218ENST00000490504 ZNF439Q8NDP4 499 aa12.72□□□□□ -0.37
PCCB-218ENST00000490504 CT45A3Q8NHU0 189 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms