RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 IGHV3-73A0A0B4J1V6 119 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 TMEM210A6NLX4 147 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 TMEM114B3SHH9 223 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 HOXA6P31267 233 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 LPAR6P43657 344 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 HAAOP46952 286 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 RAP1GDS1P52306 607 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 TNFAIP6P98066 277 aaPredicted RBP2.12□□□□□ -2.07
XRN1-213ENST00000489241 PSG4Q00888 419 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 IFITM2Q01629 132 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 LGALS9BQ3B8N2 356 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 FAM201AQ5SY85 155 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 LGALS9CQ6DKI2 356 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 C5orf46Q6UWT4 87 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 ALKAL1Q6UXT8 129 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 CCDC121Q6ZUS5 278 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 C1orf158Q8N1D5 194 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 RAB2BQ8WUD1 216 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 SLC35B4Q969S0 331 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 C12orf43Q96C57 262 aaKnown RBP2.12□□□□□ -2.07
XRN1-213ENST00000489241 IMP4Q96G21 291 aaKnown RBP2.12□□□□□ -2.07
XRN1-213ENST00000489241 MND1Q9BWT6 205 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 LRRC19Q9H756 370 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 CXorf21Q9HAI6 301 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 KLK5Q9Y337 293 aaPredicted RBP2.12□□□□□ -2.07
XRN1-213ENST00000489241 LTBP4Q8N2S1 1624 aa2.12□□□□□ -2.07
XRN1-213ENST00000489241 ZFYVE9O95405 1425 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 VPS37CA5D8V6 355 aaPredicted RBP2.11□□□□□ -2.07
XRN1-213ENST00000489241 OR4C45A6NMZ5 311 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 C17orf51A8MQB3 221 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 OR11H12B2RN74 326 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 G3V3Q6 166 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 KPNA3O00505 521 aaPredicted RBP2.11□□□□□ -2.07
XRN1-213ENST00000489241 COX7A2LO14548 114 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 KRT75O95678 551 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 CTSGP08311 255 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 CTXN2P0C2S0 81 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 SLCO1A2P46721 670 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 OMPP47874 163 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 SULT1A1P50225 295 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 ZNF140P52738 457 aaPredicted RBP2.11□□□□□ -2.07
XRN1-213ENST00000489241 SPCS3P61009 180 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 TBPL1P62380 186 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 RANP62826 216 aaKnown RBP2.11□□□□□ -2.07
XRN1-213ENST00000489241 TAF9Q16594 264 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 HIST2H3PS2Q5TEC6 136 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 ZNF322Q6U7Q0 402 aaPredicted RBP2.11□□□□□ -2.07
XRN1-213ENST00000489241 SPATA12Q7Z6I5 190 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 OR5C1Q8NGR4 320 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 OR11H2Q8NH07 326 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 LHFPL5Q8TAF8 219 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 RPS4Y2Q8TD47 263 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 SFRP2Q96HF1 295 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 SLC22A13Q9Y226 551 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 DSCAML1Q8TD84 2053 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 SHANK3Q9BYB0 1731 aa2.11□□□□□ -2.07
XRN1-213ENST00000489241 TRPM3Q9HCF6 1732 aaPredicted RBP2.11□□□□□ -2.07
XRN1-213ENST00000489241 SHROOM3Q8TF72 1996 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 IGHV1-69-2A0A0G2JMI3 117 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 GRIFINA4D1Z8 144 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 CLDN24A6NM45 220 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 C9JCJ5 164 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 INMT-MINDY4F8WBC2 141 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 UBE2L6O14933 153 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 CHP2O43745 196 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 NDUFB2O95178 105 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 IGKV4-1P06312 121 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 OR5G3P0C626 314 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 CPMP14384 443 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 ALOX5APP20292 161 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 CD200P41217 278 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 RWDD2BP57060 319 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 AP3S2P59780 193 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 STX5Q13190 355 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 PMAIP1Q13794 54 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 TMPPEQ6ZT21 453 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 C2orf91Q6ZV80 131 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 CLDN22Q8N7P3 220 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 OR2T4Q8NH00 348 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 SGMS2Q8NHU3 365 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 ANKRD7Q92527 254 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 CHMP6Q96FZ7 201 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 PECRQ9BY49 303 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 AICDAQ9GZX7 198 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 VPS29Q9UBQ0 182 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 MINOS1-NBL1R4GNA1 71 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 ZSWIM8A7E2V4 1837 aa2.1□□□□□ -2.07
XRN1-213ENST00000489241 A0A087WUU8 490 aa2.09□□□□□ -2.07
XRN1-213ENST00000489241 IGKV3D-11A0A0A0MRZ8 115 aa2.09□□□□□ -2.07
XRN1-213ENST00000489241 OR5K4A6NMS3 321 aa2.09□□□□□ -2.07
XRN1-213ENST00000489241 EEF1E1-BLOC1S5C9J1V9 151 aa2.09□□□□□ -2.07
XRN1-213ENST00000489241 E7EQL1 145 aa2.09□□□□□ -2.07
XRN1-213ENST00000489241 LST1O00453 97 aa2.09□□□□□ -2.07
XRN1-213ENST00000489241 UBFD1O14562 309 aaKnown RBP2.09□□□□□ -2.07
XRN1-213ENST00000489241 IGHV1-69P01742 117 aa2.09□□□□□ -2.07
XRN1-213ENST00000489241 FAM228BP0C875 321 aa2.09□□□□□ -2.07
XRN1-213ENST00000489241 ERVS71-1P61550 626 aa2.09□□□□□ -2.07
XRN1-213ENST00000489241 FKBP1AP62942 108 aaKnown RBP2.09□□□□□ -2.07
XRN1-213ENST00000489241 CCL7P80098 99 aa2.09□□□□□ -2.07
XRN1-213ENST00000489241 HCP5Q6MZN7 132 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms