RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 SDHAF2Q9NX18 166 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 ZNF230Q9UIE0 474 aaPredicted RBP10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 FBXO7Q9Y3I1 522 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 A3GALT2U3KPV4 340 aa10.75□□□□□ -0.69
SPTLC1-207ENST00000488921 SEC14L6B5MCN3 397 aa10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 CTXN2P0C2S0 81 aa10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 RRASP10301 218 aa10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 LGALS7P47929 136 aa10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 CDNFQ49AH0 187 aa10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 ACTBL2Q562R1 376 aa10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 DEFB121Q5J5C9 76 aa10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 HACD4Q5VWC8 232 aa10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 UNQ5815/PRO19632Q6UWF5 114 aa10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 OR1N2Q8NGR9 330 aa10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 ARPC1AQ92747 370 aa10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 KCTD12Q96CX2 325 aaKnown RBP10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 ADTRPQ96IZ2 230 aa10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 HARBI1Q96MB7 349 aa10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 CLCC1Q96S66 551 aa10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 SLA2Q9H6Q3 261 aa10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 NUBP2Q9Y5Y2 271 aa10.74□□□□□ -0.69
SPTLC1-207ENST00000488921 FCN1O00602 326 aa10.73□□□□□ -0.69
SPTLC1-207ENST00000488921 SLC25A17O43808 307 aa10.73□□□□□ -0.69
SPTLC1-207ENST00000488921 INSL3P51460 131 aa10.73□□□□□ -0.69
SPTLC1-207ENST00000488921 LUMP51884 338 aaPredicted RBP10.73□□□□□ -0.69
SPTLC1-207ENST00000488921 GNG2P59768 71 aa10.73□□□□□ -0.69
SPTLC1-207ENST00000488921 KIAA0141Q14154 515 aaPredicted RBP10.73□□□□□ -0.69
SPTLC1-207ENST00000488921 H1FOOQ8IZA3 346 aaPredicted RBP10.73□□□□□ -0.69
SPTLC1-207ENST00000488921 LGALS14Q8TCE9 139 aa10.73□□□□□ -0.69
SPTLC1-207ENST00000488921 CCDC59Q9P031 241 aaKnown RBP10.73□□□□□ -0.69
SPTLC1-207ENST00000488921 ETV7Q9Y603 341 aa10.73□□□□□ -0.69
SPTLC1-207ENST00000488921 SHOXO15266 292 aa10.72□□□□□ -0.69
SPTLC1-207ENST00000488921 SOX15O60248 233 aa10.72□□□□□ -0.69
SPTLC1-207ENST00000488921 SLC22A5O76082 557 aa10.72□□□□□ -0.69
SPTLC1-207ENST00000488921 LGALS1P09382 135 aaKnown RBP10.72□□□□□ -0.69
SPTLC1-207ENST00000488921 SNRPBP14678 240 aaKnown RBP10.72□□□□□ -0.69
SPTLC1-207ENST00000488921 LINC00205P59089 165 aa10.72□□□□□ -0.69
SPTLC1-207ENST00000488921 GNB1P62873 340 aa10.72□□□□□ -0.69
SPTLC1-207ENST00000488921 FXYD3Q14802 87 aa10.72□□□□□ -0.69
SPTLC1-207ENST00000488921 TMEM177Q53S58 311 aa10.72□□□□□ -0.69
SPTLC1-207ENST00000488921 LFNGQ8NES3 379 aa10.72□□□□□ -0.69
SPTLC1-207ENST00000488921 DYNC2LI1Q8TCX1 351 aa10.72□□□□□ -0.69
SPTLC1-207ENST00000488921 OR5B12Q96R08 314 aa10.72□□□□□ -0.69
SPTLC1-207ENST00000488921 DCUN1D5Q9BTE7 237 aa10.72□□□□□ -0.69
SPTLC1-207ENST00000488921 FAM103A1Q9BTL3 118 aaKnown RBP10.72□□□□□ -0.69
SPTLC1-207ENST00000488921 RHBDL2Q9NX52 303 aa10.72□□□□□ -0.69
SPTLC1-207ENST00000488921 TMEM235A6NFC5 223 aa10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 LINC01619G3V211 115 aa10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 H3BUA1 57 aa10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 CNIH1O95406 144 aa10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 EGR2P11161 476 aaPredicted RBP10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 TPPP2P59282 170 aa10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 CD69Q07108 199 aa10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 ZNF260Q3ZCT1 412 aa10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 ZNF645Q8N7E2 425 aa10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 BVESQ8NE79 360 aa10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 GRPEL2Q8TAA5 225 aa10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 NUDCD2Q8WVJ2 157 aa10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 TMEM68Q96MH6 324 aa10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 ST6GALNAC5Q9BVH7 336 aa10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 TPSG1Q9NRR2 321 aa10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 COMMD3Q9UBI1 195 aa10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 ELF5Q9UKW6 265 aaPredicted RBP10.71□□□□□ -0.69
SPTLC1-207ENST00000488921 IGKV1D-8A0A087WSZ0 117 aa10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 A0A0A6YYH2 397 aa10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 A6NJ64 397 aa10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 OVOL1O14753 267 aa10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 ARPC1BO15143 372 aaKnown RBP10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 RGS5O15539 181 aa10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 CREBL2O60519 120 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 IGLV2-23P01705 113 aa10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 DUTP33316 252 aaKnown RBP10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 VMA21Q3ZAQ7 101 aa10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 ASPHD1Q5U4P2 390 aa10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 CNIH2Q6PI25 160 aa10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 POC5Q8NA72 575 aa10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 MCFD2Q8NI22 146 aa10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 OSR1Q8TAX0 266 aaPredicted RBP10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 C5orf30Q96GV9 206 aa10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 B9D2Q9BPU9 175 aa10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 ADAM30Q9UKF2 790 aa10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 SPATA2Q9UM82 520 aa10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 OR2W1Q9Y3N9 320 aa10.7□□□□□ -0.7
SPTLC1-207ENST00000488921 CRYZL1O95825 349 aa10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 TRGV3P03979 118 aa10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 CRYGBP07316 175 aa10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 ECI1P42126 302 aa10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 KCTD9Q7L273 389 aa10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 ZNF429Q86V71 674 aa10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 SAMD12Q8N8I0 201 aa10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 CASTOR1Q8WTX7 329 aa10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 DDB2Q92466 427 aa10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 S100A16Q96FQ6 103 aaKnown RBP10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 CMTM3Q96MX0 182 aa10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 MS4A10Q96PG2 267 aa10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 C6orf62Q9GZU0 229 aaPredicted RBP10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 DIABLOQ9NR28 239 aa10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 ZNF355PQ9NSJ1 428 aa10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 ANXA10Q9UJ72 324 aa10.69□□□□□ -0.7
SPTLC1-207ENST00000488921 MRPS7Q9Y2R9 242 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms