RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 SH3BGRL2Q9UJC5 107 aa13.69□□□□□ -0.22
MCF2L-229ENST00000488765 IGKV1-6A0A0C4DH72 117 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 LIPT2A6NK58 231 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 PDCD6O75340 191 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 CA2P00918 260 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 PSG7Q13046 419 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 KLHDC1Q8N7A1 406 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 ZNF439Q8NDP4 499 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 RAB40CQ96S21 281 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 IGHV1OR15-9A0A0B4J2B8 117 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 CTXND1A0A1B0GTU2 59 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 IGLC7A0M8Q6 106 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 TUSC2O75896 110 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 IGKV1-39P01597 117 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 IGKV1D-39P04432 117 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 F2RP25116 425 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 FOXL1Q12952 345 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 OR52L2PQ8NGH6 319 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 ZDHHC16Q969W1 377 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 GPR27Q9NS67 375 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 MUC22E2RYF6 1773 aaPredicted RBP13.68□□□□□ -0.22
MCF2L-229ENST00000488765 MLNRO43193 412 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 CA7P43166 264 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 PP6455Q8WZ26 134 aa13.68□□□□□ -0.22
MCF2L-229ENST00000488765 ZFHX4Q86UP3 3567 aa13.67□□□□□ -0.22
MCF2L-229ENST00000488765 SH2D7A6NKC9 451 aaPredicted RBP13.67□□□□□ -0.22
MCF2L-229ENST00000488765 K7ERU9 68 aa13.67□□□□□ -0.22
MCF2L-229ENST00000488765 ZNF207O43670 478 aaKnown RBP13.67□□□□□ -0.22
MCF2L-229ENST00000488765 TSPAN2O60636 221 aa13.67□□□□□ -0.22
MCF2L-229ENST00000488765 CCNOP22674 350 aa13.67□□□□□ -0.22
MCF2L-229ENST00000488765 PMCHL2Q9BQD1 86 aa13.67□□□□□ -0.22
MCF2L-229ENST00000488765 SERTAD4Q9NUC0 356 aa13.67□□□□□ -0.22
MCF2L-229ENST00000488765 CLEC5AQ9NY25 188 aa13.67□□□□□ -0.22
MCF2L-229ENST00000488765 KLRF1Q9NZS2 232 aa13.67□□□□□ -0.22
MCF2L-229ENST00000488765 TRAV8-6A0A0B4J262 113 aa13.67□□□□□ -0.22
MCF2L-229ENST00000488765 hDV102S1A0JD36 115 aa13.67□□□□□ -0.22
MCF2L-229ENST00000488765 TAX1BP3O14907 124 aa13.67□□□□□ -0.22
MCF2L-229ENST00000488765 YPEL3P61236 119 aaPredicted RBP13.67□□□□□ -0.22
MCF2L-229ENST00000488765 PSG9Q00887 426 aa13.67□□□□□ -0.22
MCF2L-229ENST00000488765 C20orf204Q6ZNR8 217 aa13.67□□□□□ -0.22
MCF2L-229ENST00000488765 ZIC4Q8N9L1 334 aa13.67□□□□□ -0.22
MCF2L-229ENST00000488765 RNASE7Q9H1E1 156 aaKnown RBP13.67□□□□□ -0.22
MCF2L-229ENST00000488765 FNDC4Q9H6D8 234 aaPredicted RBP13.67□□□□□ -0.22
MCF2L-229ENST00000488765 TRAF3IP2O43734 574 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-229ENST00000488765 TIMP3P35625 211 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 UQCRFS1P47985 274 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 VASH2Q86V25 355 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 DOLPP1Q86YN1 238 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 OR4F17Q8NGA8 305 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 ZNF488Q96MN9 340 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 PSMG3Q9BT73 122 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-229ENST00000488765 IGKV1-5P01602 117 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 SLC25A6P12236 298 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 CCL1P22362 96 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 OR1N2Q8NGR9 330 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 REPIN1Q9BWE0 567 aaKnown RBP13.66□□□□□ -0.22
MCF2L-229ENST00000488765 QTRT1Q9BXR0 403 aaKnown RBP13.66□□□□□ -0.22
MCF2L-229ENST00000488765 CACNA1GO43497 2377 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 K7EN84 100 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 GPR6P46095 362 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-229ENST00000488765 LINC00205P59089 165 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 GABRA6Q16445 453 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 FAM53AQ6NSI3 398 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-229ENST00000488765 MMD2Q8IY49 270 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 WFDC12Q8WWY7 111 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 TMEM234Q8WY98 164 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 UBE2ZQ9H832 354 aaPredicted RBP13.66□□□□□ -0.22
MCF2L-229ENST00000488765 OR1A1Q9P1Q5 309 aa13.66□□□□□ -0.22
MCF2L-229ENST00000488765 PTPRZ1P23471 2315 aaPredicted RBP13.65□□□□□ -0.22
MCF2L-229ENST00000488765 A0A0U1RQV5 110 aa13.65□□□□□ -0.22
MCF2L-229ENST00000488765 PRRX1P54821 245 aa13.65□□□□□ -0.22
MCF2L-229ENST00000488765 OR56B2PQ8NGI1 322 aa13.65□□□□□ -0.22
MCF2L-229ENST00000488765 RARRES3Q9UL19 164 aa13.65□□□□□ -0.22
MCF2L-229ENST00000488765 MED12LQ86YW9 2145 aa13.65□□□□□ -0.22
MCF2L-229ENST00000488765 A0A087X0K7 114 aa13.65□□□□□ -0.22
MCF2L-229ENST00000488765 IGHV2-26A0A0B4J1V2 119 aa13.65□□□□□ -0.22
MCF2L-229ENST00000488765 IGHV1-69-2A0A0G2JMI3 117 aa13.65□□□□□ -0.22
MCF2L-229ENST00000488765 RNF212BA8MTL3 300 aa13.65□□□□□ -0.22
MCF2L-229ENST00000488765 ZNF324O75467 553 aaPredicted RBP13.65□□□□□ -0.22
MCF2L-229ENST00000488765 VENTXO95231 258 aa13.65□□□□□ -0.22
MCF2L-229ENST00000488765 GRB2P62993 217 aaKnown RBP13.65□□□□□ -0.22
MCF2L-229ENST00000488765 IGLV3-21P80748 117 aaPredicted RBP13.65□□□□□ -0.22
MCF2L-229ENST00000488765 PRDX4Q13162 271 aa13.65□□□□□ -0.22
MCF2L-229ENST00000488765 FOXE3Q13461 319 aa13.65□□□□□ -0.22
MCF2L-229ENST00000488765 ZNF611Q8N823 705 aa13.65□□□□□ -0.22
MCF2L-229ENST00000488765 TECRQ9NZ01 308 aaKnown RBP13.65□□□□□ -0.22
MCF2L-229ENST00000488765 A0A1W2PPV4 95 aa13.64□□□□□ -0.23
MCF2L-229ENST00000488765 COX5AP20674 150 aa13.64□□□□□ -0.23
MCF2L-229ENST00000488765 CD24P25063 80 aa13.64□□□□□ -0.23
MCF2L-229ENST00000488765 SPATA12Q7Z6I5 190 aa13.64□□□□□ -0.23
MCF2L-229ENST00000488765 NHLRC2Q8NBF2 726 aa13.64□□□□□ -0.23
MCF2L-229ENST00000488765 COPS7AQ9UBW8 275 aa13.64□□□□□ -0.23
MCF2L-229ENST00000488765 IGKV3-11P04433 115 aa13.64□□□□□ -0.23
MCF2L-229ENST00000488765 ZNF816Q0VGE8 651 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-229ENST00000488765 OR2D3Q8NGH3 330 aa13.64□□□□□ -0.23
MCF2L-229ENST00000488765 TSKUQ8WUA8 353 aa13.64□□□□□ -0.23
MCF2L-229ENST00000488765 PRDM6Q9NQX0 595 aa13.64□□□□□ -0.23
MCF2L-229ENST00000488765 RIF1Q5UIP0 2472 aaKnown RBP13.64□□□□□ -0.23
MCF2L-229ENST00000488765 CORTO00230 105 aa13.64□□□□□ -0.23
MCF2L-229ENST00000488765 FBLL1A6NHQ2 334 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms