RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 MEF2CQ06413 473 aaPredicted RBP15.83■□□□□ 0.13
CCM2-216ENST00000488727 HMGN3Q15651 99 aa15.83■□□□□ 0.13
CCM2-216ENST00000488727 CR1LQ2VPA4 569 aa15.83■□□□□ 0.13
CCM2-216ENST00000488727 BPIFCQ8NFQ6 507 aa15.83■□□□□ 0.13
CCM2-216ENST00000488727 SIRPDQ9H106 197 aa15.83■□□□□ 0.13
CCM2-216ENST00000488727 ONECUT1Q9UBC0 465 aa15.83■□□□□ 0.13
CCM2-216ENST00000488727 J3QLI3 93 aa15.82■□□□□ 0.12
CCM2-216ENST00000488727 PGLYRP1O75594 196 aaPredicted RBP15.82■□□□□ 0.12
CCM2-216ENST00000488727 NMSQ5H8A3 153 aa15.82■□□□□ 0.12
CCM2-216ENST00000488727 SLC35E4Q6ICL7 350 aa15.82■□□□□ 0.12
CCM2-216ENST00000488727 LINC00312Q9Y6C7 94 aa15.82■□□□□ 0.12
CCM2-216ENST00000488727 NSD1Q96L73 2696 aaPredicted RBP15.82■□□□□ 0.12
CCM2-216ENST00000488727 TRAV39A0A0B4J263 110 aa15.82■□□□□ 0.12
CCM2-216ENST00000488727 hADV38S2A0JD32 116 aa15.82■□□□□ 0.12
CCM2-216ENST00000488727 ZNF705EA8MWA4 302 aaPredicted RBP15.82■□□□□ 0.12
CCM2-216ENST00000488727 MMP9P14780 707 aa15.82■□□□□ 0.12
CCM2-216ENST00000488727 VDAC1P21796 283 aa15.82■□□□□ 0.12
CCM2-216ENST00000488727 DLX6P56179 175 aa15.82■□□□□ 0.12
CCM2-216ENST00000488727 C11orf42Q8N5U0 333 aa15.82■□□□□ 0.12
CCM2-216ENST00000488727 Q8N7P7 452 aa15.82■□□□□ 0.12
CCM2-216ENST00000488727 OR10V1Q8NGI7 309 aa15.82■□□□□ 0.12
CCM2-216ENST00000488727 OR13A1Q8NGR1 328 aa15.82■□□□□ 0.12
CCM2-216ENST00000488727 AKR1E2Q96JD6 320 aa15.82■□□□□ 0.12
CCM2-216ENST00000488727 MTORP42345 2549 aa15.81■□□□□ 0.12
CCM2-216ENST00000488727 ANK3Q12955 4377 aaKnown RBP15.81■□□□□ 0.12
CCM2-216ENST00000488727 TMEM30CPA0ZSE6 113 aa15.81■□□□□ 0.12
CCM2-216ENST00000488727 F2RP25116 425 aa15.81■□□□□ 0.12
CCM2-216ENST00000488727 ERVFRD-1P60508 538 aa15.81■□□□□ 0.12
CCM2-216ENST00000488727 GNMTQ14749 295 aa15.81■□□□□ 0.12
CCM2-216ENST00000488727 KIR3DL3Q8N743 410 aa15.81■□□□□ 0.12
CCM2-216ENST00000488727 C17orf50Q8WW18 174 aa15.81■□□□□ 0.12
CCM2-216ENST00000488727 NCOR1P1Q9H4R4 102 aa15.81■□□□□ 0.12
CCM2-216ENST00000488727 KPTNQ9Y664 436 aa15.81■□□□□ 0.12
CCM2-216ENST00000488727 BORCS7-ASMTA0A0B4J1R7 106 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 NKX2-1P43699 371 aaPredicted RBP15.8■□□□□ 0.12
CCM2-216ENST00000488727 DLX1P56177 255 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 BLOC1S1P78537 153 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 PJVKQ0ZLH3 352 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 FAM120AOSQ5T036 256 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 CORO2AQ92828 525 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 TBX15Q96SF7 602 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 PCGF1Q9BSM1 259 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 TRAPPC2LQ9UL33 140 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 TRGV10A0A0A0MS01 117 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 TOX4O94842 621 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 SLC25A6P12236 298 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 IL17RELQ6ZVW7 336 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 ZNF714Q96N38 554 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 GINS3Q9BRX5 216 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 PARP11Q9NR21 331 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 TMEM160Q9NX00 188 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 OR6C3Q9NZP0 311 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 OR1A1Q9P1Q5 309 aa15.8■□□□□ 0.12
CCM2-216ENST00000488727 C17orf98A8MV24 154 aa15.79■□□□□ 0.12
CCM2-216ENST00000488727 INAFM1C9JVW0 142 aa15.79■□□□□ 0.12
CCM2-216ENST00000488727 M0R1W7 72 aa15.79■□□□□ 0.12
CCM2-216ENST00000488727 SEC11BP0C7V7 166 aa15.79■□□□□ 0.12
CCM2-216ENST00000488727 CGB3P0DN86 165 aa15.79■□□□□ 0.12
CCM2-216ENST00000488727 CGB7P0DN87 165 aa15.79■□□□□ 0.12
CCM2-216ENST00000488727 PVALBP20472 110 aaPredicted RBP15.79■□□□□ 0.12
CCM2-216ENST00000488727 PRB3Q04118 309 aaPredicted RBP15.79■□□□□ 0.12
CCM2-216ENST00000488727 PXDC1Q5TGL8 231 aa15.79■□□□□ 0.12
CCM2-216ENST00000488727 VMO1Q7Z5L0 202 aa15.79■□□□□ 0.12
CCM2-216ENST00000488727 MRGPRDQ8TDS7 321 aa15.79■□□□□ 0.12
CCM2-216ENST00000488727 BSCL2Q96G97 398 aaPredicted RBP15.79■□□□□ 0.12
CCM2-216ENST00000488727 SMIM3Q9BZL3 60 aa15.79■□□□□ 0.12
CCM2-216ENST00000488727 SIRT7Q9NRC8 400 aa15.79■□□□□ 0.12
CCM2-216ENST00000488727 FN1P02751 2386 aaKnown RBP15.78■□□□□ 0.12
CCM2-216ENST00000488727 A0A1W2PPH5 198 aa15.78■□□□□ 0.12
CCM2-216ENST00000488727 TMEM218A2RU14 115 aa15.78■□□□□ 0.12
CCM2-216ENST00000488727 MED6O75586 246 aa15.78■□□□□ 0.12
CCM2-216ENST00000488727 APOC3P02656 99 aa15.78■□□□□ 0.12
CCM2-216ENST00000488727 ID3Q02535 119 aa15.78■□□□□ 0.12
CCM2-216ENST00000488727 OR2C3Q8N628 320 aa15.78■□□□□ 0.12
CCM2-216ENST00000488727 WFDC1Q9HC57 220 aa15.78■□□□□ 0.12
CCM2-216ENST00000488727 PLA2G2EQ9NZK7 142 aa15.78■□□□□ 0.12
CCM2-216ENST00000488727 IGLV2-14P01704 120 aa15.77■□□□□ 0.12
CCM2-216ENST00000488727 LPAR6P43657 344 aa15.77■□□□□ 0.12
CCM2-216ENST00000488727 EWSR1Q01844 656 aaKnown RBP eCLIP15.77■□□□□ 0.12
CCM2-216ENST00000488727 C17orf58Q2M2W7 97 aa15.77■□□□□ 0.12
CCM2-216ENST00000488727 BTNL8Q6UX41 500 aa15.77■□□□□ 0.12
CCM2-216ENST00000488727 C1orf122Q6ZSJ8 110 aa15.77■□□□□ 0.12
CCM2-216ENST00000488727 IL1F10Q8WWZ1 152 aa15.77■□□□□ 0.12
CCM2-216ENST00000488727 TNFRSF14Q92956 283 aa15.77■□□□□ 0.12
CCM2-216ENST00000488727 MS4A7Q9GZW8 240 aaPredicted RBP15.77■□□□□ 0.12
CCM2-216ENST00000488727 TOLLIPQ9H0E2 274 aa15.77■□□□□ 0.12
CCM2-216ENST00000488727 MMP23AO75900 390 aa15.77■□□□□ 0.11
CCM2-216ENST00000488727 SPP1P10451 314 aa15.77■□□□□ 0.11
CCM2-216ENST00000488727 SSTR5P35346 364 aa15.77■□□□□ 0.11
CCM2-216ENST00000488727 KLF17Q5JT82 389 aaPredicted RBP15.77■□□□□ 0.11
CCM2-216ENST00000488727 C10orf91Q5T1B1 145 aa15.77■□□□□ 0.11
CCM2-216ENST00000488727 LYPD6BQ8NI32 183 aa15.77■□□□□ 0.11
CCM2-216ENST00000488727 GPHA2Q96T91 129 aa15.77■□□□□ 0.11
CCM2-216ENST00000488727 UNKLQ9H9P5 680 aaKnown RBP15.77■□□□□ 0.11
CCM2-216ENST00000488727 FAM212BQ9NTI7 297 aaPredicted RBP15.77■□□□□ 0.11
CCM2-216ENST00000488727 LYRM2Q9NU23 88 aaPredicted RBP15.77■□□□□ 0.11
CCM2-216ENST00000488727 ZNF729A6NN14 1252 aaPredicted RBP15.76■□□□□ 0.11
CCM2-216ENST00000488727 TNFSF12O43508 249 aa15.76■□□□□ 0.11
CCM2-216ENST00000488727 FSHBP01225 129 aa15.76■□□□□ 0.11
CCM2-216ENST00000488727 OMGP23515 440 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms