RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 KIR2DL5AQ8N109 375 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 TCTEX1D1Q8N7M0 179 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 ZNF781Q8N8C0 355 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 CSNK1G2-AS1Q8NCQ2 148 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 SPATA4Q8NEY3 305 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 OR9Q2Q8NGE9 314 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 OR5A2Q8NGI9 324 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 OR4D6Q8NGJ1 314 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 OR8J1Q8NGP2 316 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 KIR2DL5BQ8NHK3 375 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 HAVCR2Q8TDQ0 301 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 GTF2H4Q92759 462 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 TAMM41Q96BW9 452 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 SPACA5Q96QH8 159 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 CHST6Q9GZX3 395 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 TSPYL1Q9H0U9 437 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 VCX3BQ9H321 246 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 GPR173Q9NS66 373 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 PEF1Q9UBV8 284 aaKnown RBP3.18□□□□□ -1.9
BRCA1-217ENST00000487825 SLC7A11Q9UPY5 501 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 POLDIP2Q9Y2S7 368 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 SAR1BQ9Y6B6 198 aa3.18□□□□□ -1.9
BRCA1-217ENST00000487825 FAM240BA0A1B0GVZ2 78 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 RPL37AP8A6NKH3 93 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 LANCL1O43813 399 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 AIREO43918 545 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 SNNO75324 88 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-217ENST00000487825 WBP4O75554 376 aaKnown RBP3.17□□□□□ -1.9
BRCA1-217ENST00000487825 CRTAPO75718 401 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-217ENST00000487825 NDUFB2O95178 105 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 RENP00797 406 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 SERPINA3P01011 423 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 IFNA10P01566 189 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 GPX2P18283 190 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 PPIBP23284 216 aaKnown RBP3.17□□□□□ -1.9
BRCA1-217ENST00000487825 DUTP33316 252 aaKnown RBP3.17□□□□□ -1.9
BRCA1-217ENST00000487825 HTR2BP41595 481 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 HAAOP46952 286 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 OR3A1P47881 315 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 CRYBA2P53672 197 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 ZNF121P58317 390 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-217ENST00000487825 TPPP2P59282 170 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 ACTBP60709 375 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 GRB2P62993 217 aaKnown RBP3.17□□□□□ -1.9
BRCA1-217ENST00000487825 SRPXP78539 464 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 NDPQ00604 133 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 PPP1R8Q12972 351 aaKnown RBP3.17□□□□□ -1.9
BRCA1-217ENST00000487825 ECSCRQ19T08 205 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 C17orf58Q2M2W7 97 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 DEFB114Q30KQ6 69 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 ZBED5Q49AG3 693 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 LEMD1Q68G75 181 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 ZNF660Q6AZW8 331 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-217ENST00000487825 DEGS2Q6QHC5 323 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 ANGPTL5Q86XS5 388 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 FAM219AQ8IW50 185 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 YIPF7Q8N8F6 280 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 DYNLRB2Q8TF09 96 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 UBLCP1Q8WVY7 318 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-217ENST00000487825 RASSF5Q8WWW0 418 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 RFT1Q96AA3 541 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 SLAMF6Q96DU3 332 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 SPAG8Q99932 426 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-217ENST00000487825 CNOT2Q9NZN8 540 aaKnown RBP3.17□□□□□ -1.9
BRCA1-217ENST00000487825 PRO0461Q9UI25 63 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 KLHDC2Q9Y2U9 406 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 IER3IP1Q9Y5U9 82 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 TNXBP22105 4242 aa3.17□□□□□ -1.9
BRCA1-217ENST00000487825 TMEM120BA0PK00 339 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 ZNF729A6NN14 1252 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-217ENST00000487825 ZNF736B4DX44 427 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-217ENST00000487825 F8VVB4 439 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 F8VWA3 439 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 HAND1O96004 215 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 IGHV3-7P01780 117 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 APOC1P02654 83 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 GAPDHP04406 335 aaKnown RBP3.16□□□□□ -1.9
BRCA1-217ENST00000487825 PRKACAP17612 351 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 GABRR1P24046 479 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 NFYBP25208 207 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 HSD11B1P28845 292 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 FCGR2BP31994 310 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-217ENST00000487825 REG1BP48304 166 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 CNN1P51911 297 aaKnown RBP3.16□□□□□ -1.9
BRCA1-217ENST00000487825 MTCP1P56278 107 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 FXYD6P3P58550 94 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 ABCE1P61221 599 aaKnown RBP3.16□□□□□ -1.9
BRCA1-217ENST00000487825 ADARB1P78563 741 aaKnown RBP3.16□□□□□ -1.9
BRCA1-217ENST00000487825 ST3GAL3Q11203 375 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 TATDN3Q17R31 274 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 LRRC36Q1X8D7 754 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 SLX4IPQ5VYV7 408 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 CD200R1LQ6Q8B3 271 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 ZNF600Q6ZNG1 722 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 TPRA1Q86W33 373 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 UBE2DNLQ8IWF7 75 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 C6orf223Q8N319 242 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 OR10X1Q8NGY0 326 aa3.16□□□□□ -1.9
BRCA1-217ENST00000487825 MITD1Q8WV92 249 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms