RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 SF3B5Q9BWJ5 86 aaKnown RBP10.4□□□□□ -0.74
HSPG2-211ENST00000486901 SAMD10Q9BYL1 202 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 ACTR3CQ9C0K3 210 aaPredicted RBP10.4□□□□□ -0.74
HSPG2-211ENST00000486901 DEFB127Q9H1M4 99 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 TUBG2Q9NRH3 451 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 PLXNB1O43157 2135 aa10.4□□□□□ -0.74
HSPG2-211ENST00000486901 NOTCH3Q9UM47 2321 aa10.4□□□□□ -0.75
HSPG2-211ENST00000486901 MKRN2OSH3BPM6 223 aa10.4□□□□□ -0.75
HSPG2-211ENST00000486901 HPRT1P00492 218 aa10.4□□□□□ -0.75
HSPG2-211ENST00000486901 MBP02144 154 aa10.4□□□□□ -0.75
HSPG2-211ENST00000486901 CYB561P49447 251 aa10.4□□□□□ -0.75
HSPG2-211ENST00000486901 BAGE3Q86Y29 109 aa10.4□□□□□ -0.75
HSPG2-211ENST00000486901 BAGE2Q86Y30 109 aa10.4□□□□□ -0.75
HSPG2-211ENST00000486901 ABHD12Q8N2K0 398 aa10.4□□□□□ -0.75
HSPG2-211ENST00000486901 APOBEC3DQ96AK3 386 aaPredicted RBP10.4□□□□□ -0.75
HSPG2-211ENST00000486901 DIRC2Q96SL1 478 aa10.4□□□□□ -0.75
HSPG2-211ENST00000486901 ARRDC1-AS1Q9H2J1 176 aa10.4□□□□□ -0.75
HSPG2-211ENST00000486901 METRNQ9UJH8 293 aa10.4□□□□□ -0.75
HSPG2-211ENST00000486901 COL5A1P20908 1838 aaPredicted RBP10.4□□□□□ -0.75
HSPG2-211ENST00000486901 CTXND1A0A1B0GTU2 59 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 MYOD1P15172 320 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 COX5AP20674 150 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 HOXA6P31267 233 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 IER3P46695 156 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 GNG3P63215 75 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 FXYD3Q14802 87 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 ACTL10Q5JWF8 245 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 HES3Q5TGS1 186 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 SPATA31B1PQ5VZV4 182 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 LINC01551Q86U37 167 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 SPEM1Q8N4L4 309 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 GBGT1Q8N5D6 347 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 TMEM105Q8N8V8 129 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 OR2Y1Q8NGV0 311 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 RNF114Q9Y508 228 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 FKBP2P26885 142 aaKnown RBP10.39□□□□□ -0.75
HSPG2-211ENST00000486901 ZNF90Q03938 601 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 H2BFWTQ7Z2G1 175 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 SCCPDHQ8NBX0 429 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 PINX1Q96BK5 328 aaKnown RBP10.39□□□□□ -0.75
HSPG2-211ENST00000486901 NOL4LQ96MY1 436 aaPredicted RBP10.39□□□□□ -0.75
HSPG2-211ENST00000486901 QTRT1Q9BXR0 403 aaKnown RBP10.39□□□□□ -0.75
HSPG2-211ENST00000486901 LIN7CQ9NUP9 197 aaKnown RBP10.39□□□□□ -0.75
HSPG2-211ENST00000486901 TMEM242Q9NWH2 141 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 SPTBN4Q9H254 2564 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 ARL14EPLP0DKL9 152 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 DMRTA1Q5VZB9 504 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 NHLRC2Q8NBF2 726 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 CMTM2Q8TAZ6 248 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 APH1AQ96BI3 265 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 P2RX4Q99571 388 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 PRDM14Q9GZV8 571 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 OBP2BQ9NPH6 170 aa10.39□□□□□ -0.75
HSPG2-211ENST00000486901 LINC00473A8K010 186 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 TGOLN2O43493 480 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 SERF1AO75920 110 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 IGHEP01854 428 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 PMCHP20382 165 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 KITLGP21583 273 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 CD82P27701 267 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 PRAMEF6Q5VXH4 476 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 KCNIP4Q6PIL6 250 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 SAP25Q8TEE9 199 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 PSMG3Q9BT73 122 aaPredicted RBP10.38□□□□□ -0.75
HSPG2-211ENST00000486901 RYDENQ9NUL5 291 aaKnown RBP10.38□□□□□ -0.75
HSPG2-211ENST00000486901 LYZL6O75951 148 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 GCGP01275 180 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 DHRS13Q6UX07 377 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 Q6ZWC4 215 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 MDP1Q86V88 176 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 ZNF573Q86YE8 665 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 DNASE2BQ8WZ79 361 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 BTF3L4Q96K17 158 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 SH3BGRL2Q9UJC5 107 aa10.38□□□□□ -0.75
HSPG2-211ENST00000486901 TRAV3A0A0B4J244 114 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 LRP5LA4QPB2 252 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 FCGR3BO75015 233 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 FOXH1O75593 365 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 RAC2P15153 192 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 TNFSF10P50591 281 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 CARFQ8N187 725 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 OCC1Q8TAD7 63 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 TMEM208Q9BTX3 173 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 MDFIC2A0A1B0GVS7 189 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 DUXBA0A1W2PPF3 345 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 C12orf77C9JDV5 145 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 F6UZH7 168 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 RRHO14718 337 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 AGFG2O95081 481 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 GATA2P23769 480 aaPredicted RBP10.37□□□□□ -0.75
HSPG2-211ENST00000486901 ERVFC1-1P60608 527 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 UTF1Q5T230 341 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 SPSB4Q96A44 273 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 POM121L2Q96KW2 1035 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 TMEM147Q9BVK8 224 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 TCFL5Q9UL49 500 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 LRRC30A6NM36 301 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 SH2D1BO14796 132 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 TDGF1P3P51864 188 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 FAM19A2Q8N3H0 131 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms