RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 HOXB1P14653 301 aaPredicted RBP7.58□□□□□ -1.2
GABRE-209ENST00000486255 TNFRSF9Q07011 255 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 ZNF124Q15973 351 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 MARVELD3Q96A59 401 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 TMEM101Q96IK0 257 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 C2orf88Q9BSF0 95 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 TMEM222Q9H0R3 208 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 IGHV3OR16-12A0A075B7B8 117 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 LIPT2A6NK58 231 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 NTN1O95631 604 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 CT62P0C5K7 136 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 GPR183P32249 361 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 IFITM3Q01628 133 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 LILRA6Q6PI73 481 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 ATG4DQ86TL0 474 aaPredicted RBP7.58□□□□□ -1.2
GABRE-209ENST00000486255 C18orf15Q96N68 181 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 CHST5Q9GZS9 411 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 APOHP02749 345 aaPredicted RBP7.58□□□□□ -1.2
GABRE-209ENST00000486255 PNLIPP16233 465 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 EIF4EBP2Q13542 120 aaPredicted RBP7.58□□□□□ -1.2
GABRE-209ENST00000486255 GGTLC2Q14390 218 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 MMDQ15546 238 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 HIKESHIQ53FT3 197 aa7.58□□□□□ -1.2
GABRE-209ENST00000486255 PRSS23O95084 383 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 S1PR2O95136 353 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 CD3EP07766 207 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 ASAH2BP0C7U1 165 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 LURAP1LQ8IV03 231 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 SF3B5Q9BWJ5 86 aaKnown RBP7.57□□□□□ -1.2
GABRE-209ENST00000486255 IL36BQ9NZH7 164 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 CA11O75493 328 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 HOXA5P20719 270 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 PAPPA-AS1Q5QFB9 102 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 ZFAND6Q6FIF0 208 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 FLRT3Q9NZU0 649 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 SLC25A10Q9UBX3 287 aaPredicted RBP7.57□□□□□ -1.2
GABRE-209ENST00000486255 A0A0U1RQV5 110 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 K7N7A8 449 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 GPR146Q96CH1 333 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 LCTP09848 1927 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 TRBV7-9A0A0J9YWB2 115 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 A0A1W2PQD3 144 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 TNFSF14O43557 240 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 RPS11P62280 158 aaKnown RBP eCLIP7.57□□□□□ -1.2
GABRE-209ENST00000486255 SELENOTP62341 195 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 C1QL3Q5VWW1 255 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 TRAV17A0A0B4J275 112 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 P2RY4P51582 365 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 TGIF1Q15583 401 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 PRSS41Q7RTY9 318 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 STPG3Q8N7X2 389 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 DDB2Q92466 427 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 MRPL32Q9BYC8 188 aaKnown RBP7.57□□□□□ -1.2
GABRE-209ENST00000486255 WDR54Q9H977 334 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 LAMTOR2Q9Y2Q5 125 aa7.57□□□□□ -1.2
GABRE-209ENST00000486255 TRAV12-3A0A0B4J271 114 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 SPAARA0A1B0GVQ0 90 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 A0A1W2PP11 408 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 BGLAPP02818 100 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 C8orf88P0DMB2 117 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 RPL27AP46776 148 aaKnown RBP7.56□□□□□ -1.2
GABRE-209ENST00000486255 PAX2Q02962 417 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 SNAI3Q3KNW1 292 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 CENPWQ5EE01 88 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 SCGB3A1Q96QR1 104 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 ZNF257Q9Y2Q1 563 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 SCN10AQ9Y5Y9 1956 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 ZNF729A6NN14 1252 aaPredicted RBP7.56□□□□□ -1.2
GABRE-209ENST00000486255 PGLYRP1O75594 196 aaPredicted RBP7.56□□□□□ -1.2
GABRE-209ENST00000486255 ATP5LO75964 103 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 CLDN14O95500 239 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 CD1AP06126 327 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 MFAP4P55083 255 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 SSPNQ14714 243 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 FAM74A4Q5TZK3 123 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 OR5AN1Q8NGI8 311 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 DNASE2BQ8WZ79 361 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 SSBP3Q9BWW4 388 aaPredicted RBP7.56□□□□□ -1.2
GABRE-209ENST00000486255 GPX1P07203 203 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 CXorf66Q5JRM2 361 aaPredicted RBP7.56□□□□□ -1.2
GABRE-209ENST00000486255 TIMM23BQ5SRD1 257 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 CITED1Q99966 193 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 PPP1R3EQ9H7J1 279 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 ZFP64Q9NPA5 681 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 H3BRM9 83 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 HOXA3O43365 443 aaPredicted RBP7.56□□□□□ -1.2
GABRE-209ENST00000486255 CCDC144NLQ6NUI1 221 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 APCDD1LQ8NCL9 501 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 SP7Q8TDD2 431 aaPredicted RBP7.56□□□□□ -1.2
GABRE-209ENST00000486255 RNASEH2CQ8TDP1 164 aaKnown RBP7.56□□□□□ -1.2
GABRE-209ENST00000486255 PKIBQ9C010 78 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 MRPS18AQ9NVS2 196 aaKnown RBP7.56□□□□□ -1.2
GABRE-209ENST00000486255 KLHDC2Q9Y2U9 406 aa7.56□□□□□ -1.2
GABRE-209ENST00000486255 LINC00614P0C842 121 aa7.55□□□□□ -1.2
GABRE-209ENST00000486255 EFNB1P98172 346 aa7.55□□□□□ -1.2
GABRE-209ENST00000486255 CBLN3Q6UW01 205 aa7.55□□□□□ -1.2
GABRE-209ENST00000486255 TMEM106BQ9NUM4 274 aa7.55□□□□□ -1.2
GABRE-209ENST00000486255 GPR132Q9UNW8 380 aa7.55□□□□□ -1.2
GABRE-209ENST00000486255 CARHSP1Q9Y2V2 147 aaKnown RBP7.55□□□□□ -1.2
GABRE-209ENST00000486255 SCN1AP35498 2009 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms