RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 MMP7P09237 267 aaPredicted RBP1.93□□□□□ -2.1
VPS41-213ENST00000485955 OR10J4P0C629 311 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 OR13C7P0DN81 318 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 IGKV1-13P0DP09 117 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 IFI30P13284 250 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 ATF1P18846 271 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 TCN2P20062 427 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 OMGP23515 440 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 CXCR1P25024 350 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 SLC6A1P30531 599 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 FMO3P31513 532 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 RCVRNP35243 200 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 HIST1H3AP68431 136 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 H3F3AP84243 136 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 PSG4Q00888 419 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 REG3AQ06141 175 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 RSU1Q15404 277 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 SNRNP35Q16560 246 aaKnown RBP1.93□□□□□ -2.1
VPS41-213ENST00000485955 WHAMMP3Q1A5X7 153 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 TMEM183BQ1AE95 376 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 CEACAM16Q2WEN9 425 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 KLHL12Q53G59 568 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 TTC32Q5I0X7 151 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 FAM78BQ5VT40 261 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 TMEM215Q68D42 235 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 RPL13AP3Q6NVV1 102 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 SFXN4Q6P4A7 337 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 SLC25A34Q6PIV7 304 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 XKRXQ6PP77 449 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 ZNF620Q6ZNG0 422 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 HIST2H3AQ71DI3 136 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 PEX26Q7Z412 305 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 OAFQ86UD1 273 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 TMEM183AQ8IXX5 376 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 UBALD2Q8IYN6 164 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 C1orf158Q8N1D5 194 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 LRRC18Q8N456 261 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 COX18Q8N8Q8 333 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 CHST4Q8NCG5 386 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 OR2M7Q8NG81 312 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 OR8J3Q8NGG0 315 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 OR10G9Q8NGN4 311 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 OR6N1Q8NGY5 312 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 OR4X1Q8NH49 305 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 OR13C6PQ8NH95 151 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 SDR42E1Q8WUS8 393 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 SKA2Q8WVK7 121 aaPredicted RBP1.93□□□□□ -2.1
VPS41-213ENST00000485955 CYGBQ8WWM9 190 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 RDH12Q96NR8 316 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 FAAP24Q9BTP7 215 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 RIOK2Q9BVS4 552 aaKnown RBP1.93□□□□□ -2.1
VPS41-213ENST00000485955 SPNS1Q9H2V7 528 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 RPF2Q9H7B2 306 aaKnown RBP1.93□□□□□ -2.1
VPS41-213ENST00000485955 WFDC1Q9HC57 220 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 RGS18Q9NS28 235 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 IDI2-AS1Q9NZ38 188 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 DNAJC27Q9NZQ0 273 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 CLCF1Q9UBD9 225 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 VAX2Q9UIW0 290 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 DKKL1Q9UK85 242 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 ZNF257Q9Y2Q1 563 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 POLR1DQ9Y2S0 133 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 SIGLEC9Q9Y336 463 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 ASB4Q9Y574 426 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 HEBP2Q9Y5Z4 205 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 HIVEP3Q5T1R4 2406 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 BSNQ9UPA5 3926 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 RTL9Q8NET4 1388 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 TONSLQ96HA7 1378 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 ABCC12Q96J65 1359 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 PTPRFP10586 1907 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 PDZD2O15018 2839 aa1.93□□□□□ -2.1
VPS41-213ENST00000485955 CREBBPQ92793 2442 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 ARAP2Q8WZ64 1704 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 ECM29Q5VYK3 1845 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 IGLV11-55A0A075B6I3 123 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 A0A087WUJ7 227 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 IGLV1-36A0A0B4J1U3 117 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 IGSF23A1L1A6 192 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 RBMY1BA6NDE4 496 aaKnown RBP1.92□□□□□ -2.1
VPS41-213ENST00000485955 RBMY1EA6NEQ0 496 aaKnown RBP1.92□□□□□ -2.1
VPS41-213ENST00000485955 C12orf77C9JDV5 145 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 ATP6V1G2-DDX39BF2Z307 99 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 MANBAO00462 879 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 CD5LO43866 347 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 REM1O75628 298 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 RBMY1DP0C7P1 496 aaKnown RBP1.92□□□□□ -2.1
VPS41-213ENST00000485955 RBMY1A1P0DJD3 496 aaKnown RBP1.92□□□□□ -2.1
VPS41-213ENST00000485955 SULT1A3P0DMM9 295 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 SULT1A4P0DMN0 295 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 OR5H8P0DN80 308 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 ESDP10768 282 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 CD79AP11912 226 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 GABRA1P14867 456 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 ZNF708P17019 499 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 MIPP30301 263 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 DYNLL1P63167 89 aaKnown RBP1.92□□□□□ -2.1
VPS41-213ENST00000485955 HBG1P69891 147 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 HBG2P69892 147 aa1.92□□□□□ -2.1
VPS41-213ENST00000485955 SLC35A2P78381 396 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms