RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 IGKV1-16P04430 117 aa14.09□□□□□ -0.15
CHMP3-207ENST00000485465 VSIG10L2P0DP72 767 aa14.09□□□□□ -0.15
CHMP3-207ENST00000485465 RAB25P57735 213 aa14.09□□□□□ -0.15
CHMP3-207ENST00000485465 SUPT4H1P63272 117 aaKnown RBP14.09□□□□□ -0.15
CHMP3-207ENST00000485465 CBX3Q13185 183 aa14.09□□□□□ -0.15
CHMP3-207ENST00000485465 PPP1R1AQ13522 171 aa14.09□□□□□ -0.15
CHMP3-207ENST00000485465 HES1Q14469 280 aa14.09□□□□□ -0.15
CHMP3-207ENST00000485465 SP6Q3SY56 376 aa14.09□□□□□ -0.15
CHMP3-207ENST00000485465 DHRS7BQ6IAN0 325 aaPredicted RBP14.09□□□□□ -0.15
CHMP3-207ENST00000485465 C11orf88Q6PI97 169 aa14.09□□□□□ -0.15
CHMP3-207ENST00000485465 RBMS3Q6XE24 437 aaKnown RBP14.09□□□□□ -0.15
CHMP3-207ENST00000485465 OR2T10Q8NGZ9 312 aa14.09□□□□□ -0.15
CHMP3-207ENST00000485465 OR4S2Q8NH73 311 aa14.09□□□□□ -0.15
CHMP3-207ENST00000485465 SSMEM1Q8WWF3 244 aa14.09□□□□□ -0.15
CHMP3-207ENST00000485465 EAF1Q96JC9 268 aaPredicted RBP14.09□□□□□ -0.15
CHMP3-207ENST00000485465 BEX1Q9HBH7 125 aa14.09□□□□□ -0.15
CHMP3-207ENST00000485465 FAM212BQ9NTI7 297 aaPredicted RBP14.09□□□□□ -0.15
CHMP3-207ENST00000485465 MXRA5Q9NR99 2828 aa14.08□□□□□ -0.16
CHMP3-207ENST00000485465 INMT-MINDY4F8WBC2 141 aa14.08□□□□□ -0.16
CHMP3-207ENST00000485465 HOXA3O43365 443 aaPredicted RBP14.08□□□□□ -0.16
CHMP3-207ENST00000485465 CRYZL1O95825 349 aa14.08□□□□□ -0.16
CHMP3-207ENST00000485465 OR5AC1P0C628 307 aa14.08□□□□□ -0.16
CHMP3-207ENST00000485465 OR4E1P0C645 316 aa14.08□□□□□ -0.16
CHMP3-207ENST00000485465 RAG2P55895 527 aa14.08□□□□□ -0.16
CHMP3-207ENST00000485465 OXA1LQ15070 435 aa14.08□□□□□ -0.16
CHMP3-207ENST00000485465 ZNF585BQ52M93 769 aa14.08□□□□□ -0.16
CHMP3-207ENST00000485465 FBLN7Q53RD9 439 aa14.08□□□□□ -0.16
CHMP3-207ENST00000485465 TMEM177Q53S58 311 aa14.08□□□□□ -0.16
CHMP3-207ENST00000485465 OR4C13Q8NGP0 309 aa14.08□□□□□ -0.16
CHMP3-207ENST00000485465 OR5R1Q8NH85 324 aa14.08□□□□□ -0.16
CHMP3-207ENST00000485465 FLYWCH2Q96CP2 140 aaKnown RBP14.08□□□□□ -0.16
CHMP3-207ENST00000485465 GALNT14Q96FL9 552 aa14.08□□□□□ -0.16
CHMP3-207ENST00000485465 NAV3Q8IVL0 2385 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 A6NDX4 124 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 SFT2D2O95562 160 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 IFNA2P01563 188 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 SERPINE2P07093 398 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 TMEM11P17152 192 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 VAMP1P23763 118 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 UCP1P25874 307 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 LPAR6P43657 344 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 RPS16P62249 146 aaKnown RBP14.07□□□□□ -0.16
CHMP3-207ENST00000485465 HNF4GQ14541 408 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 SLC9A3R2Q15599 337 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 TRIM16LQ309B1 348 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 C4orf46Q504U0 113 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 Q8N6K4 173 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 ZNF418Q8TF45 676 aaPredicted RBP14.07□□□□□ -0.16
CHMP3-207ENST00000485465 RITA1Q96K30 269 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 RNF5Q99942 180 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 TMEM222Q9H0R3 208 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 TCF19Q9Y242 345 aa14.07□□□□□ -0.16
CHMP3-207ENST00000485465 C9orf170A2RU37 121 aa14.06□□□□□ -0.16
CHMP3-207ENST00000485465 BTBD17A6NE02 478 aa14.06□□□□□ -0.16
CHMP3-207ENST00000485465 HPRT1P00492 218 aa14.06□□□□□ -0.16
CHMP3-207ENST00000485465 IL5P05113 134 aa14.06□□□□□ -0.16
CHMP3-207ENST00000485465 ANXA3P12429 323 aa14.06□□□□□ -0.16
CHMP3-207ENST00000485465 TMEM187Q14656 261 aa14.06□□□□□ -0.16
CHMP3-207ENST00000485465 LY6EQ16553 131 aa14.06□□□□□ -0.16
CHMP3-207ENST00000485465 LYG2Q86SG7 212 aa14.06□□□□□ -0.16
CHMP3-207ENST00000485465 TMEM86BQ8N661 226 aa14.06□□□□□ -0.16
CHMP3-207ENST00000485465 MINDY2Q8NBR6 621 aa14.06□□□□□ -0.16
CHMP3-207ENST00000485465 OSR1Q8TAX0 266 aaPredicted RBP14.06□□□□□ -0.16
CHMP3-207ENST00000485465 GLYATL2Q8WU03 294 aa14.06□□□□□ -0.16
CHMP3-207ENST00000485465 CHPT1Q8WUD6 406 aa14.06□□□□□ -0.16
CHMP3-207ENST00000485465 PLEKHA2Q9HB19 425 aa14.06□□□□□ -0.16
CHMP3-207ENST00000485465 POMT1Q9Y6A1 747 aa14.06□□□□□ -0.16
CHMP3-207ENST00000485465 SHOXO15266 292 aa14.05□□□□□ -0.16
CHMP3-207ENST00000485465 S1PR2O95136 353 aa14.05□□□□□ -0.16
CHMP3-207ENST00000485465 DHFRP00374 187 aa14.05□□□□□ -0.16
CHMP3-207ENST00000485465 HLA-AP01891 365 aaKnown RBP14.05□□□□□ -0.16
CHMP3-207ENST00000485465 RPA2P15927 270 aa14.05□□□□□ -0.16
CHMP3-207ENST00000485465 LGALS7P47929 136 aa14.05□□□□□ -0.16
CHMP3-207ENST00000485465 DHRS2Q13268 280 aa14.05□□□□□ -0.16
CHMP3-207ENST00000485465 HARBI1Q96MB7 349 aa14.05□□□□□ -0.16
CHMP3-207ENST00000485465 TNFRSF19Q9NS68 423 aa14.05□□□□□ -0.16
CHMP3-207ENST00000485465 PITPNC1Q9UKF7 332 aa14.05□□□□□ -0.16
CHMP3-207ENST00000485465 NSD1Q96L73 2696 aaPredicted RBP14.05□□□□□ -0.16
CHMP3-207ENST00000485465 SRRM4A7MD48 611 aaKnown RBP14.04□□□□□ -0.16
CHMP3-207ENST00000485465 PRAF2O60831 178 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 CDS2O95674 445 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 IGKV1-39P01597 117 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 IGKV1D-39P04432 117 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 CNTFRP26992 372 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 F2RL1P55085 397 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 LIAT1Q6ZQX7 453 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 TMEM219Q86XT9 240 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 OR52B4Q8NGK2 314 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 CASTOR1Q8WTX7 329 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 TMEM56Q96MV1 263 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 RBM14Q96PK6 669 aaKnown RBP14.04□□□□□ -0.16
CHMP3-207ENST00000485465 TSNAXQ99598 290 aaKnown RBP14.04□□□□□ -0.16
CHMP3-207ENST00000485465 SEC22CQ9BRL7 303 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 ESM1Q9NQ30 184 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 PRR13Q9NZ81 148 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 COMMD9Q9P000 198 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 VPREB3Q9UKI3 123 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 TMEM56-RWDD3S4R434 201 aa14.04□□□□□ -0.16
CHMP3-207ENST00000485465 FN1P02751 2386 aaKnown RBP14.03□□□□□ -0.16
CHMP3-207ENST00000485465 DNAJC9-AS1A6NH13 148 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms