RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 PPWD1Q96BP3 646 aaKnown RBP0.14□□□□□ -2.39
SFPQ-209ENST00000485454 LRRC39Q96DD0 335 aa0.14□□□□□ -2.39
SFPQ-209ENST00000485454 SFRP2Q96HF1 295 aa0.14□□□□□ -2.39
SFPQ-209ENST00000485454 TTTY13Q9BZ97 58 aa0.14□□□□□ -2.39
SFPQ-209ENST00000485454 KIAA0232Q92628 1395 aa0.14□□□□□ -2.39
SFPQ-209ENST00000485454 RP1P56715 2156 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 HEATR5AQ86XA9 2040 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 A0A087WUU8 490 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 ASS1P00966 412 aaKnown RBP0.13□□□□□ -2.39
SFPQ-209ENST00000485454 CST4P01036 141 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 LIMS3P0CW19 117 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 LIMS4P0CW20 117 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 ALDH3A1P30838 453 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 PSMD7P51665 324 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 FXYD7P58549 80 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 DAD1P61803 113 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 TMEM249Q2WGJ8 235 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 PLPPR5Q32ZL2 321 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 C10orf55Q5SWW7 151 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.13□□□□□ -2.39
SFPQ-209ENST00000485454 ATP5L2Q7Z4Y8 100 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 ST13P4Q8IZP2 240 aaPredicted RBP0.13□□□□□ -2.39
SFPQ-209ENST00000485454 RNASE6Q93091 150 aaKnown RBP0.13□□□□□ -2.39
SFPQ-209ENST00000485454 TMEM56Q96MV1 263 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 FAM210AQ96ND0 272 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 IMMP2LQ96T52 175 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 NMNAT3Q96T66 252 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 PRRG3Q9BZD7 231 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 RABL2AQ9UBK7 228 aaPredicted RBP0.13□□□□□ -2.39
SFPQ-209ENST00000485454 THSD7AQ9UPZ6 1657 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 TTC28Q96AY4 2481 aa0.13□□□□□ -2.39
SFPQ-209ENST00000485454 FRAS1Q86XX4 4008 aa0.12□□□□□ -2.39
SFPQ-209ENST00000485454 SCAF11Q99590 1463 aaKnown RBP0.12□□□□□ -2.39
SFPQ-209ENST00000485454 TRAV7A0A075B6U4 112 aa0.12□□□□□ -2.39
SFPQ-209ENST00000485454 A0A0J9YW62 118 aa0.12□□□□□ -2.39
SFPQ-209ENST00000485454 F5H5K5 113 aa0.12□□□□□ -2.39
SFPQ-209ENST00000485454 COPEO14579 308 aa0.12□□□□□ -2.39
SFPQ-209ENST00000485454 LIN7AO14910 233 aaPredicted RBP0.12□□□□□ -2.39
SFPQ-209ENST00000485454 SGCEO43556 437 aa0.12□□□□□ -2.39
SFPQ-209ENST00000485454 CREBL2O60519 120 aaPredicted RBP0.12□□□□□ -2.39
SFPQ-209ENST00000485454 LGALS1P09382 135 aaKnown RBP0.12□□□□□ -2.39
SFPQ-209ENST00000485454 DEFA4P12838 97 aa0.12□□□□□ -2.39
SFPQ-209ENST00000485454 ETV1P50549 477 aa0.12□□□□□ -2.39
SFPQ-209ENST00000485454 HIST1H4AP62805 103 aaKnown RBP0.12□□□□□ -2.39
SFPQ-209ENST00000485454 TMEM267Q0VDI3 215 aaPredicted RBP0.12□□□□□ -2.39
SFPQ-209ENST00000485454 BAP18Q8IXM2 172 aa0.12□□□□□ -2.39
SFPQ-209ENST00000485454 C1orf174Q8IYL3 243 aa0.12□□□□□ -2.39
SFPQ-209ENST00000485454 TMEM86AQ8N2M4 240 aa0.12□□□□□ -2.39
SFPQ-209ENST00000485454 PACRGLQ8N7B6 248 aa0.12□□□□□ -2.39
SFPQ-209ENST00000485454 C9orf163Q8N9P6 203 aa0.12□□□□□ -2.39
SFPQ-209ENST00000485454 CCDC12Q8WUD4 166 aaPredicted RBP0.12□□□□□ -2.39
SFPQ-209ENST00000485454 EMC3Q9P0I2 261 aa0.12□□□□□ -2.39
SFPQ-209ENST00000485454 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.12□□□□□ -2.39
SFPQ-209ENST00000485454 RBM7Q9Y580 266 aaKnown RBP0.12□□□□□ -2.39
SFPQ-209ENST00000485454 TNRC6BQ9UPQ9 1833 aaKnown RBP0.12□□□□□ -2.39
SFPQ-209ENST00000485454 GLI3P10071 1580 aa0.11□□□□□ -2.39
SFPQ-209ENST00000485454 FLT4P35916 1363 aa0.11□□□□□ -2.39
SFPQ-209ENST00000485454 TRAV38-1A0A0B4J264 116 aa0.11□□□□□ -2.39
SFPQ-209ENST00000485454 MEIS3P1A6NDR6 274 aa0.11□□□□□ -2.39
SFPQ-209ENST00000485454 H0YC42 278 aa0.11□□□□□ -2.39
SFPQ-209ENST00000485454 TAS2R20P59543 309 aa0.11□□□□□ -2.39
SFPQ-209ENST00000485454 SNAP25P60880 206 aa0.11□□□□□ -2.39
SFPQ-209ENST00000485454 AP1S1P61966 158 aa0.11□□□□□ -2.39
SFPQ-209ENST00000485454 TBPL1P62380 186 aa0.11□□□□□ -2.39
SFPQ-209ENST00000485454 TNNC1P63316 161 aa0.11□□□□□ -2.39
SFPQ-209ENST00000485454 XIAPP98170 497 aa0.11□□□□□ -2.39
SFPQ-209ENST00000485454 LRRC20Q8TCA0 184 aa0.11□□□□□ -2.39
SFPQ-209ENST00000485454 RORBQ92753 470 aa0.11□□□□□ -2.39
SFPQ-209ENST00000485454 TLCD1Q96CP7 247 aa0.11□□□□□ -2.39
SFPQ-209ENST00000485454 MS4A6EQ96DS6 147 aa0.11□□□□□ -2.39
SFPQ-209ENST00000485454 MRM2Q9UI43 246 aaKnown RBP0.11□□□□□ -2.39
SFPQ-209ENST00000485454 ENPP5Q9UJA9 477 aa0.11□□□□□ -2.39
SFPQ-209ENST00000485454 TRAV8-1A0A0A6YYK1 113 aa0.1□□□□□ -2.39
SFPQ-209ENST00000485454 OR51F1A6NGY5 319 aa0.1□□□□□ -2.39
SFPQ-209ENST00000485454 M0R381 172 aa0.1□□□□□ -2.39
SFPQ-209ENST00000485454 TRGC1P0CF51 173 aa0.1□□□□□ -2.39
SFPQ-209ENST00000485454 RPL28P46779 137 aaKnown RBP0.1□□□□□ -2.39
SFPQ-209ENST00000485454 RAB8AP61006 207 aa0.1□□□□□ -2.39
SFPQ-209ENST00000485454 RAB14P61106 215 aa0.1□□□□□ -2.39
SFPQ-209ENST00000485454 LCN8Q6JVE9 175 aa0.1□□□□□ -2.39
SFPQ-209ENST00000485454 UMODL1-AS1Q8N2C9 162 aa0.1□□□□□ -2.39
SFPQ-209ENST00000485454 SMIM12Q96EX1 92 aa0.1□□□□□ -2.39
SFPQ-209ENST00000485454 GMEB1Q9Y692 573 aa0.1□□□□□ -2.39
SFPQ-209ENST00000485454 FAT4Q6V0I7 4981 aa0.1□□□□□ -2.39
SFPQ-209ENST00000485454 SETD5Q9C0A6 1442 aa0.1□□□□□ -2.39
SFPQ-209ENST00000485454 EIF4G1Q04637 1599 aaKnown RBP0.1□□□□□ -2.39
SFPQ-209ENST00000485454 NUP153P49790 1475 aaKnown RBP0.1□□□□□ -2.39
SFPQ-209ENST00000485454 OR6C6A6NF89 314 aa0.09□□□□□ -2.4
SFPQ-209ENST00000485454 IBA57-AS1B1ANH7 110 aa0.09□□□□□ -2.4
SFPQ-209ENST00000485454 H3BT86 120 aa0.09□□□□□ -2.4
SFPQ-209ENST00000485454 SULT1C2O00338 296 aa0.09□□□□□ -2.4
SFPQ-209ENST00000485454 SYNGR1O43759 233 aa0.09□□□□□ -2.4
SFPQ-209ENST00000485454 CFL1P23528 166 aaKnown RBP0.09□□□□□ -2.4
SFPQ-209ENST00000485454 H2BFSP57053 126 aa0.09□□□□□ -2.4
SFPQ-209ENST00000485454 TMEM33P57088 247 aa0.09□□□□□ -2.4
SFPQ-209ENST00000485454 C9orf64Q5T6V5 341 aa0.09□□□□□ -2.4
SFPQ-209ENST00000485454 C12orf29Q8N999 325 aa0.09□□□□□ -2.4
SFPQ-209ENST00000485454 ZNF565Q8N9K5 539 aa0.09□□□□□ -2.4
SFPQ-209ENST00000485454 Q8WTZ3 238 aa0.09□□□□□ -2.4
SFPQ-209ENST00000485454 CHST6Q9GZX3 395 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms