RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 FAM231DQ6ZW35 169 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 ZNF283Q8N7M2 679 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 OR52N5Q8NH56 324 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 Q8TCH9 128 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 EFCAB1Q9HAE3 211 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 NMNAT1Q9HAN9 279 aaPredicted RBP4.28□□□□□ -1.72
CCDC39-205ENST00000485055 NOX3Q9HBY0 568 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 ELF5Q9UKW6 265 aaPredicted RBP4.28□□□□□ -1.72
CCDC39-205ENST00000485055 MED12Q93074 2177 aa4.28□□□□□ -1.72
CCDC39-205ENST00000485055 ZNF469Q96JG9 3925 aaPredicted RBP4.28□□□□□ -1.72
CCDC39-205ENST00000485055 UNC119BA6NIH7 251 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 SLC22A5O76082 557 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 HLA-DOBP13765 273 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 HTR1DP28221 377 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 OPRL1P41146 370 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 RAB25P57735 213 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 UNC119Q13432 240 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 ZBED5Q49AG3 693 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 TMEM97Q5BJF2 176 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 CLEC12AQ5QGZ9 265 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 HOGA1Q86XE5 327 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 OR4P4Q8NGL7 312 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 OR10A6Q8NH74 314 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 ACOT12Q8WYK0 555 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 GHSRQ92847 366 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 DNAJA3Q96EY1 480 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 C4orf45Q96LM5 186 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 APOL4Q9BPW4 351 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 DCSTAMPQ9H295 470 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 BAIAP2Q9UQB8 552 aa4.28□□□□□ -1.73
CCDC39-205ENST00000485055 OR4C46A6NHA9 309 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 G3V2T6 193 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 CD14P08571 375 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 MUC1P15941 1255 aaPredicted RBP4.27□□□□□ -1.73
CCDC39-205ENST00000485055 VHLP40337 213 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 DEFA1P59665 94 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 LMO4P61968 165 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 ENDOGQ14249 297 aaKnown RBP4.27□□□□□ -1.73
CCDC39-205ENST00000485055 OR8G1Q15617 311 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 MSMPQ1L6U9 139 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 ZDHHC13Q8IUH4 622 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 BEST4Q8NFU0 473 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 TMEM158Q8WZ71 300 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 SPANXB1Q9NS25 103 aaPredicted RBP4.27□□□□□ -1.73
CCDC39-205ENST00000485055 SIGLEC7Q9Y286 467 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 WIPI2Q9Y4P8 454 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 FAM25AB3EWG3 89 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 FAM25CB3EWG5 89 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 FAM25GB3EWG6 89 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 DVL1O14640 695 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 BUB3O43684 328 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 S100A8P05109 93 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 YAP1P46937 504 aaKnown RBP4.27□□□□□ -1.73
CCDC39-205ENST00000485055 BIDP55957 195 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 MTPNP58546 118 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 ST3GAL4Q11206 333 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 ECH1Q13011 328 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 UBE2UQ5VVX9 321 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 OR10K2Q6IF99 312 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 LINC00482Q8N8I6 264 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 OR2H1Q9GZK4 316 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 FBXL15Q9H469 300 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 HMG20AQ9NP66 347 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 AURKAIP1Q9NWT8 199 aaPredicted RBP4.27□□□□□ -1.73
CCDC39-205ENST00000485055 ING4Q9UNL4 249 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 SIGLEC9Q9Y336 463 aa4.27□□□□□ -1.73
CCDC39-205ENST00000485055 F8P00451 2351 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 IGHV2-70DA0A0C4DH43 119 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 OR5H14A6NHG9 310 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 B4DSR2 109 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 EI24O14681 340 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 IFNA4P05014 189 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 SLC25A1P53007 311 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 ZNF91Q05481 1191 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 EDDM3AQ14507 147 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 ARL9Q6T311 187 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 GATD1Q8NB37 220 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 SLC30A7Q8NEW0 376 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 OR1L8Q8NGR8 309 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 RARRES2Q99969 163 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 PDCD1LG2Q9BQ51 273 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 SLC25A39Q9BZJ4 359 aaPredicted RBP4.26□□□□□ -1.73
CCDC39-205ENST00000485055 RNF167Q9H6Y7 350 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 MBNL3Q9NUK0 354 aaKnown RBP4.26□□□□□ -1.73
CCDC39-205ENST00000485055 NOP16Q9Y3C1 178 aaKnown RBP4.26□□□□□ -1.73
CCDC39-205ENST00000485055 ABCA4P78363 2273 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 A0A087WUU8 490 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 IGLV1-36A0A0B4J1U3 117 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 IQCMA0A1B0GVH7 501 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 hDV102S1A0JD36 115 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 M0R233 179 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 TAAR5O14804 337 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 LMX1BO60663 402 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 NGFP01138 241 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 SELEP16581 610 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 RIPPLY1Q0D2K3 151 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 ZNF726P1Q15940 193 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 SNX29P2Q8IUI4 249 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 MAPKAPK5-AS1Q8N8E1 139 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 OR8U1Q8NH10 309 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms