RNA–Protein interactions for RNA: ENST00000484752.5

RFTN1-210, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-210ENST00000484752 VSTM2AQ8TAG5 236 aa9.37□□□□□ -0.91
RFTN1-210ENST00000484752 GLYATL2Q8WU03 294 aa9.37□□□□□ -0.91
RFTN1-210ENST00000484752 DDB2Q92466 427 aa9.37□□□□□ -0.91
RFTN1-210ENST00000484752 GPHA2Q96T91 129 aa9.37□□□□□ -0.91
RFTN1-210ENST00000484752 SPIN2AQ99865 258 aa9.37□□□□□ -0.91
RFTN1-210ENST00000484752 RNF5Q99942 180 aa9.37□□□□□ -0.91
RFTN1-210ENST00000484752 SPIN2BQ9BPZ2 258 aa9.37□□□□□ -0.91
RFTN1-210ENST00000484752 RAB18Q9NP72 206 aa9.37□□□□□ -0.91
RFTN1-210ENST00000484752 TMEM160Q9NX00 188 aa9.37□□□□□ -0.91
RFTN1-210ENST00000484752 TMED3Q9Y3Q3 217 aa9.37□□□□□ -0.91
RFTN1-210ENST00000484752 ABCA2Q9BZC7 2435 aa9.37□□□□□ -0.91
RFTN1-210ENST00000484752 CR1P17927 2039 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 CSMD1Q96PZ7 3565 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 hCG_2014768A0A024R1R8 64 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 A0A1W2PPI3 338 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 BTBD17A6NE02 478 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 TIMM23O14925 209 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 SHOXO15266 292 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 PROP1O75360 226 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 CRYZL1O95825 349 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 TRAPPC2P0DI81 140 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 TRAPPC2BP0DI82 140 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 LGALS7P47929 136 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 RRAS2P62070 204 aaPredicted RBP9.36□□□□□ -0.91
RFTN1-210ENST00000484752 DIAPH2-AS1Q14236 149 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 HES1Q14469 280 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 AANATQ16613 207 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 RUSC1-AS1Q66K80 236 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 C9orf139Q6ZV77 190 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 DMBX1Q8NFW5 382 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 OR2T10Q8NGZ9 312 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 ASB13Q8WXK3 278 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 HARBI1Q96MB7 349 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 TSNAXQ99598 290 aaKnown RBP9.36□□□□□ -0.91
RFTN1-210ENST00000484752 PDCD10Q9BUL8 212 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 CACFD1Q9UGQ2 172 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 ITPR3Q14573 2671 aa9.36□□□□□ -0.91
RFTN1-210ENST00000484752 A0A0B4J293 547 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 A0A0U1RQK1 487 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 MARCH11A6NNE9 402 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 GOSR2O14653 212 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 RAMP3O60896 148 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 MOSP00540 346 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 AVPP01185 164 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 VDAC1P21796 283 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 DYNLT3P51808 116 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 RPS16P62249 146 aaKnown RBP9.35□□□□□ -0.91
RFTN1-210ENST00000484752 CYCSP99999 105 aaKnown RBP9.35□□□□□ -0.91
RFTN1-210ENST00000484752 HABP2Q14520 560 aaPredicted RBP9.35□□□□□ -0.91
RFTN1-210ENST00000484752 ANKRD55Q3KP44 614 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 VMA21Q3ZAQ7 101 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 TMEM177Q53S58 311 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 KLF17Q5JT82 389 aaPredicted RBP9.35□□□□□ -0.91
RFTN1-210ENST00000484752 FAM120AOSQ5T036 256 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 GSG1LQ6UXU4 331 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 C1orf229Q6ZS94 237 aaPredicted RBP9.35□□□□□ -0.91
RFTN1-210ENST00000484752 THNSL2Q86YJ6 484 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 SLC35G3Q8N808 338 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 LSM10Q969L4 123 aaKnown RBP9.35□□□□□ -0.91
RFTN1-210ENST00000484752 ZDHHC16Q969W1 377 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 R3HDM4Q96D70 268 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 MEGF9Q9H1U4 602 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 KIAA1456Q9P272 454 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 MGAT4CQ9UBM8 478 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 MED13LQ71F56 2210 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 ARHGAP32A7KAX9 2087 aa9.35□□□□□ -0.91
RFTN1-210ENST00000484752 WNK2Q9Y3S1 2297 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 IGHV3-72A0A0B4J1Y9 119 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 C5orf51A6NDU8 294 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 VGLL3A8MV65 326 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 FAM25EA8MYX2 175 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 S1PR2O95136 353 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 SPDEFO95238 335 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 KRASP01116 189 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 FSHBP01225 129 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 HOXB5P09067 269 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 BCAP31P51572 246 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 LRRC75BQ2VPJ9 315 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 ZNF585BQ52M93 769 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 CLEC9AQ6UXN8 241 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 RBMS3Q6XE24 437 aaKnown RBP9.34□□□□□ -0.91
RFTN1-210ENST00000484752 H2BFWTQ7Z2G1 175 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 SELENOHQ8IZQ5 122 aaKnown RBP9.34□□□□□ -0.91
RFTN1-210ENST00000484752 OR8H1Q8NGG4 311 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 TMUB1Q9BVT8 246 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 C1RLQ9NZP8 487 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 PITPNC1Q9UKF7 332 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 CDC42EP3Q9UKI2 254 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 MMP24Q9Y5R2 645 aa9.34□□□□□ -0.91
RFTN1-210ENST00000484752 C13orf42A0A1B0GVH6 325 aa9.33□□□□□ -0.92
RFTN1-210ENST00000484752 HMX3A6NHT5 357 aa9.33□□□□□ -0.92
RFTN1-210ENST00000484752 DBX1A6NMT0 343 aa9.33□□□□□ -0.92
RFTN1-210ENST00000484752 FAM90A9PA6NNJ1 464 aa9.33□□□□□ -0.92
RFTN1-210ENST00000484752 RBMXL2O75526 392 aaKnown RBP9.33□□□□□ -0.92
RFTN1-210ENST00000484752 VENTXO95231 258 aa9.33□□□□□ -0.92
RFTN1-210ENST00000484752 IGKV1D-33P01593 117 aa9.33□□□□□ -0.92
RFTN1-210ENST00000484752 IGKV1-33P01594 117 aa9.33□□□□□ -0.92
RFTN1-210ENST00000484752 IGKV1-16P04430 117 aa9.33□□□□□ -0.92
RFTN1-210ENST00000484752 SNRNP70P08621 437 aaKnown RBP9.33□□□□□ -0.92
RFTN1-210ENST00000484752 TMEM11P17152 192 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms