RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PLPPR5Q32ZL2 321 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 HSP90B2PQ58FF3 399 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 TMEM31Q5JXX7 168 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 Q6ZTI0 123 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 SLC35E3Q7Z769 313 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 CD302Q8IX05 232 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 FAM9CQ8IZT9 166 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 C10orf126Q8N4M7 172 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 OR5J2Q8NH18 312 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 CLDND2Q8NHS1 167 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 ZNF563Q8TA94 476 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 FGF13Q92913 245 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 ANKRD36BP1Q96IX9 119 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 ZNF514Q96K75 400 aaPredicted RBP0.57□□□□□ -2.32
SCAF11-207ENST00000484275 SLC35G5Q96KT7 338 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 TIPINQ9BVW5 301 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 HDGFL3Q9Y3E1 203 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 HEATR5AQ86XA9 2040 aa0.57□□□□□ -2.32
SCAF11-207ENST00000484275 DOCK5Q9H7D0 1870 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 NUP160Q12769 1436 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 MUC5BQ9HC84 5762 aaPredicted RBP0.56□□□□□ -2.32
SCAF11-207ENST00000484275 A0A087WUU8 490 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 TRGV5A0A0B4J1U4 118 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 TINCRA0A1B0GVN0 87 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 LINC00854A0A1B0GVQ3 168 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 A0A1B0GW54 56 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 OR6C6A6NF89 314 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 J3QQQ9 107 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 AZIN1O14977 448 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 BIRC5O15392 142 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 KRT75O95678 551 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 GPX1P07203 203 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 PRB4P10163 310 aaPredicted RBP0.56□□□□□ -2.32
SCAF11-207ENST00000484275 CXCL2P19875 107 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 CXCL3P19876 107 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 GABRA2P47869 451 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 SERPINB10P48595 397 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 CDC34P49427 236 aaPredicted RBP0.56□□□□□ -2.32
SCAF11-207ENST00000484275 RPL14P50914 215 aaKnown RBP0.56□□□□□ -2.32
SCAF11-207ENST00000484275 IDH3GP51553 393 aaPredicted RBP0.56□□□□□ -2.32
SCAF11-207ENST00000484275 RAP1GDS1P52306 607 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 EMP1P54849 157 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 CLDN12P56749 244 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 CXCR4P61073 352 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 RPL26P61254 145 aaKnown RBP0.56□□□□□ -2.32
SCAF11-207ENST00000484275 AP1S1P61966 158 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 TBPL1P62380 186 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 FKBP1AP62942 108 aaKnown RBP0.56□□□□□ -2.32
SCAF11-207ENST00000484275 HLA-DRB3P79483 266 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 HPCAP84074 193 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 ERHP84090 104 aaKnown RBP0.56□□□□□ -2.32
SCAF11-207ENST00000484275 MED21Q13503 144 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 GNA13Q14344 377 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 TPRXLQ17RH7 258 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 LGALS9BQ3B8N2 356 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 TNFAIP8L2Q6P589 184 aaPredicted RBP0.56□□□□□ -2.32
SCAF11-207ENST00000484275 DRAM2Q6UX65 266 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 FUNDC1Q8IVP5 155 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 C1orf174Q8IYL3 243 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 LRRC34Q8IZ02 419 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 Q8N402 240 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 OR4X2Q8NGF9 303 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 JOSD2Q8TAC2 188 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 RPS4Y2Q8TD47 263 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 SMCR5Q8TEV8 140 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 SMIM19Q96E16 107 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 PACRGQ96M98 296 aaPredicted RBP0.56□□□□□ -2.32
SCAF11-207ENST00000484275 C7orf50Q9BRJ6 194 aaKnown RBP0.56□□□□□ -2.32
SCAF11-207ENST00000484275 TIMM21Q9BVV7 248 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 NSRP1Q9H0G5 558 aaKnown RBP0.56□□□□□ -2.32
SCAF11-207ENST00000484275 HDHD2Q9H0R4 259 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 HES4Q9HCC6 221 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 SLC2A9Q9NRM0 540 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 NRBP2Q9NSY0 501 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 BABAM2Q9NXR7 383 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 EURLQ9NYK6 297 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 RPL26L1Q9UNX3 145 aaKnown RBP0.56□□□□□ -2.32
SCAF11-207ENST00000484275 HHLA3Q9XRX5 114 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 POLR3HQ9Y535 204 aaPredicted RBP0.56□□□□□ -2.32
SCAF11-207ENST00000484275 ECM29Q5VYK3 1845 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 ABCC12Q96J65 1359 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 MAP3K5Q99683 1374 aa0.56□□□□□ -2.32
SCAF11-207ENST00000484275 RGS12O14924 1447 aa0.55□□□□□ -2.32
SCAF11-207ENST00000484275 GLI3P10071 1580 aa0.55□□□□□ -2.32
SCAF11-207ENST00000484275 MEIKINA0A087WXM9 373 aa0.55□□□□□ -2.32
SCAF11-207ENST00000484275 TRAV41A0A0B4J266 112 aa0.55□□□□□ -2.32
SCAF11-207ENST00000484275 A0A1W2PQD3 144 aa0.55□□□□□ -2.32
SCAF11-207ENST00000484275 FABP12A6NFH5 140 aa0.55□□□□□ -2.32
SCAF11-207ENST00000484275 F8W036 122 aa0.55□□□□□ -2.32
SCAF11-207ENST00000484275 TXNDC9O14530 226 aa0.55□□□□□ -2.32
SCAF11-207ENST00000484275 ITGB1BP1O14713 200 aa0.55□□□□□ -2.32
SCAF11-207ENST00000484275 ATP8B1O43520 1251 aa0.55□□□□□ -2.32
SCAF11-207ENST00000484275 APOMO95445 188 aa0.55□□□□□ -2.32
SCAF11-207ENST00000484275 BPGMP07738 259 aa0.55□□□□□ -2.32
SCAF11-207ENST00000484275 PSMB8P28062 276 aa0.55□□□□□ -2.32
SCAF11-207ENST00000484275 CD40LGP29965 261 aa0.55□□□□□ -2.32
SCAF11-207ENST00000484275 PEBP1P30086 187 aaKnown RBP0.55□□□□□ -2.32
SCAF11-207ENST00000484275 ALDH3A1P30838 453 aa0.55□□□□□ -2.32
SCAF11-207ENST00000484275 MAP3K7CLP57077 242 aa0.55□□□□□ -2.32
SCAF11-207ENST00000484275 TAS2R20P59543 309 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms