RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 PLEKHA2Q9HB19 425 aa11.36□□□□□ -0.59
SMAD9-204ENST00000483941 ZFP57Q9NU63 452 aa11.36□□□□□ -0.59
SMAD9-204ENST00000483941 VDAC1P21796 283 aa11.35□□□□□ -0.59
SMAD9-204ENST00000483941 TMEM249Q2WGJ8 235 aa11.35□□□□□ -0.59
SMAD9-204ENST00000483941 RPL39P5Q59GN2 51 aa11.35□□□□□ -0.59
SMAD9-204ENST00000483941 TMEM268Q5VZI3 342 aa11.35□□□□□ -0.59
SMAD9-204ENST00000483941 FAM219AQ8IW50 185 aa11.35□□□□□ -0.59
SMAD9-204ENST00000483941 OR8H3Q8N146 312 aa11.35□□□□□ -0.59
SMAD9-204ENST00000483941 OR4P4Q8NGL7 312 aa11.35□□□□□ -0.59
SMAD9-204ENST00000483941 OR5M8Q8NGP6 311 aa11.35□□□□□ -0.59
SMAD9-204ENST00000483941 RNASE11Q8TAA1 199 aaKnown RBP11.35□□□□□ -0.59
SMAD9-204ENST00000483941 LSM10Q969L4 123 aaKnown RBP11.35□□□□□ -0.59
SMAD9-204ENST00000483941 ST6GALNAC6Q969X2 333 aa11.35□□□□□ -0.59
SMAD9-204ENST00000483941 RRNAD1Q96FB5 475 aaKnown RBP11.35□□□□□ -0.59
SMAD9-204ENST00000483941 ZNF251Q9BRH9 671 aa11.35□□□□□ -0.59
SMAD9-204ENST00000483941 PDCD10Q9BUL8 212 aa11.35□□□□□ -0.59
SMAD9-204ENST00000483941 ZNF436Q9C0F3 470 aaPredicted RBP11.35□□□□□ -0.59
SMAD9-204ENST00000483941 C7orf69Q9H7B7 122 aa11.35□□□□□ -0.59
SMAD9-204ENST00000483941 COMMD9Q9P000 198 aa11.35□□□□□ -0.59
SMAD9-204ENST00000483941 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMAD9-204ENST00000483941 C5orf51A6NDU8 294 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 ODF3BA8MYP8 253 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 GOSR2O14653 212 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 FCGR3BO75015 233 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 SNAPC5O75971 98 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 HRASP01112 189 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 TGFAP01135 160 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 GIPP09681 153 aaPredicted RBP11.34□□□□□ -0.59
SMAD9-204ENST00000483941 FAM157CP0CG43 387 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 LPAR6P43657 344 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 RAP2BP61225 183 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 ERVK-16P61578 105 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 FGL1Q08830 312 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 ZNF816Q0VGE8 651 aaPredicted RBP11.34□□□□□ -0.59
SMAD9-204ENST00000483941 KRTAP24-1Q3LI83 254 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 GPR157Q5UAW9 335 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 THOC7Q6I9Y2 204 aaKnown RBP11.34□□□□□ -0.59
SMAD9-204ENST00000483941 PDPNQ86YL7 162 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 SELENOHQ8IZQ5 122 aaKnown RBP11.34□□□□□ -0.59
SMAD9-204ENST00000483941 OR5AN1Q8NGI8 311 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 MALSU1Q96EH3 234 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 TBX15Q96SF7 602 aa11.34□□□□□ -0.59
SMAD9-204ENST00000483941 A8MV72 311 aaPredicted RBP11.33□□□□□ -0.6
SMAD9-204ENST00000483941 FAM25EA8MYX2 175 aa11.33□□□□□ -0.6
SMAD9-204ENST00000483941 HOXB5P09067 269 aa11.33□□□□□ -0.6
SMAD9-204ENST00000483941 CT45A6P0DMU7 189 aa11.33□□□□□ -0.6
SMAD9-204ENST00000483941 CT45A5P0DMU8 189 aa11.33□□□□□ -0.6
SMAD9-204ENST00000483941 CT45A7P0DMV0 189 aa11.33□□□□□ -0.6
SMAD9-204ENST00000483941 SLC25A6P12236 298 aa11.33□□□□□ -0.6
SMAD9-204ENST00000483941 NQO2P16083 231 aa11.33□□□□□ -0.6
SMAD9-204ENST00000483941 RPL30P62888 115 aaKnown RBP11.33□□□□□ -0.6
SMAD9-204ENST00000483941 TPTE2P1Q5T6R2 138 aa11.33□□□□□ -0.6
SMAD9-204ENST00000483941 OR4C13Q8NGP0 309 aa11.33□□□□□ -0.6
SMAD9-204ENST00000483941 OSR1Q8TAX0 266 aaPredicted RBP11.33□□□□□ -0.6
SMAD9-204ENST00000483941 DDB2Q92466 427 aa11.33□□□□□ -0.6
SMAD9-204ENST00000483941 LHX4Q969G2 390 aa11.33□□□□□ -0.6
SMAD9-204ENST00000483941 RNF5Q99942 180 aa11.33□□□□□ -0.6
SMAD9-204ENST00000483941 NMES1Q9C002 83 aa11.33□□□□□ -0.6
SMAD9-204ENST00000483941 SLC35D1Q9NTN3 355 aa11.33□□□□□ -0.6
SMAD9-204ENST00000483941 WASHC3Q9Y3C0 194 aa11.33□□□□□ -0.6
SMAD9-204ENST00000483941 C13orf42A0A1B0GVH6 325 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 LINC00473A8K010 186 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 RNASEK-C17orf49H0YIS7 233 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 LY6LH3BQJ8 138 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 H7C2Y5 167 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 PROP1O75360 226 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 OR2A4O95047 310 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 IGHV4-31P0DP07 118 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 AKR1C2P52895 323 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 CD83Q01151 205 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 UTF1Q5T230 341 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 GGNBP1Q5YKI7 109 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 HCP5Q6MZN7 132 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 TCTE3Q8IZS6 198 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 SLC35G3Q8N808 338 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 ZNF383Q8NA42 475 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 DRAXINQ8NBI3 349 aaPredicted RBP11.32□□□□□ -0.6
SMAD9-204ENST00000483941 OR11H7Q8NGC8 314 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 FLYWCH2Q96CP2 140 aaKnown RBP11.32□□□□□ -0.6
SMAD9-204ENST00000483941 C5orf30Q96GV9 206 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 C2orf50Q96LR7 162 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 OR2A7Q96R45 310 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 NABP2Q9BQ15 211 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 MRPL20Q9BYC9 149 aaKnown RBP11.32□□□□□ -0.6
SMAD9-204ENST00000483941 MMP24Q9Y5R2 645 aa11.32□□□□□ -0.6
SMAD9-204ENST00000483941 IGHV1-69DA0A0B4J2H0 117 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 IGHV1-3A0A0C4DH29 117 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 A0A1B0GU03 582 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 FAM90A9PA6NNJ1 464 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 NPFFO15130 113 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 IGHV1-69P01742 117 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 PET100P0DJ07 73 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 CXCL3P19876 107 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 BRS3P32247 399 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 LGALS7P47929 136 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 SRSF4Q08170 494 aaKnown RBP11.31□□□□□ -0.6
SMAD9-204ENST00000483941 ZNF585BQ52M93 769 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 LYZL2Q7Z4W2 148 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 MOB3BQ86TA1 216 aa11.31□□□□□ -0.6
SMAD9-204ENST00000483941 VSTM2AQ8TAG5 236 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms