RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 GGCTO75223 188 aaKnown RBP8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 IGHV3-23P01764 117 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 SCTP09683 121 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 CTRB1P17538 263 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 HLA-DRB3P79483 266 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 SMN1Q16637 294 aaKnown RBP8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 PRSS8Q16651 343 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 TMEM177Q53S58 311 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 CTRB2Q6GPI1 263 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 MOB1BQ7L9L4 216 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 CDH26Q8IXH8 852 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 TMEM217Q8N7C4 229 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 NECAP1Q8NC96 275 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 FBLIM1Q8WUP2 373 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 APH1BQ8WW43 257 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 C5orf30Q96GV9 206 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 PGLYRP3Q96LB9 341 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 Q96MT0 163 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 FGF20Q9NP95 211 aaPredicted RBP8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 BABAM2Q9NXR7 383 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 UBQLN2Q9UHD9 624 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 EXOSC1Q9Y3B2 195 aaKnown RBP8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 S4R3C0 116 aa8.04□□□□□ -1.12
SMARCC1-205ENST00000483847 A0A0A6YYD4 124 aa8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 ZNF320A2RRD8 509 aa8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 A8MWP6 167 aa8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 SHOXO15266 292 aa8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 FCGR2BP31994 310 aaPredicted RBP8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 RPS27AP62979 156 aaKnown RBP8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 ANKRD55Q3KP44 614 aa8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 YIF1BQ5BJH7 314 aa8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 C10orf55Q5SWW7 151 aa8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 GPHB5Q86YW7 130 aa8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 OR1L6Q8NGR2 347 aa8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 ACOT12Q8WYK0 555 aa8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 CCDC140Q96MF4 163 aa8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 RDH8Q9NYR8 311 aa8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 FBXL17Q9UF56 701 aa8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 CLEC2DQ9UHP7 191 aa8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 AK3Q9UIJ7 227 aa8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 RPL36Q9Y3U8 105 aaKnown RBP8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 ORC6Q9Y5N6 252 aa8.03□□□□□ -1.12
SMARCC1-205ENST00000483847 TRBV6-6A0A0A6YYG2 114 aa8.02□□□□□ -1.13
SMARCC1-205ENST00000483847 UBE2CO00762 179 aa8.02□□□□□ -1.13
SMARCC1-205ENST00000483847 XRCC3O43542 346 aa8.02□□□□□ -1.13
SMARCC1-205ENST00000483847 S1PR2O95136 353 aa8.02□□□□□ -1.13
SMARCC1-205ENST00000483847 RPL35AP18077 110 aaKnown RBP8.02□□□□□ -1.13
SMARCC1-205ENST00000483847 ARL3P36405 182 aa8.02□□□□□ -1.13
SMARCC1-205ENST00000483847 TAGLNQ01995 201 aaKnown RBP8.02□□□□□ -1.13
SMARCC1-205ENST00000483847 UNC119Q13432 240 aa8.02□□□□□ -1.13
SMARCC1-205ENST00000483847 CLEC19AQ6UXS0 136 aa8.02□□□□□ -1.13
SMARCC1-205ENST00000483847 TMPRSS11AQ6ZMR5 421 aa8.02□□□□□ -1.13
SMARCC1-205ENST00000483847 TTC9CQ8N5M4 171 aa8.02□□□□□ -1.13
SMARCC1-205ENST00000483847 STPG3Q8N7X2 389 aa8.02□□□□□ -1.13
SMARCC1-205ENST00000483847 DERL3Q96Q80 235 aa8.02□□□□□ -1.13
SMARCC1-205ENST00000483847 SLC29A1Q99808 456 aa8.02□□□□□ -1.13
SMARCC1-205ENST00000483847 UQCC2Q9BRT2 126 aa8.02□□□□□ -1.13
SMARCC1-205ENST00000483847 SDHAF2Q9NX18 166 aa8.02□□□□□ -1.13
SMARCC1-205ENST00000483847 HSPG2P98160 4391 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 KIR2DL5BA0A0G2JN68 375 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 KIR2DL5BA0A0G2JPC4 375 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 PNMA8CA0A1B0GUJ8 204 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 HMX3A6NHT5 357 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 WBP4O75554 376 aaKnown RBP8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 CD3GP09693 182 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 UBE2KP61086 200 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 RBMS2Q15434 407 aaKnown RBP8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 ODF3L2Q3SX64 289 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 LINC01559Q495D7 138 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 C1orf146Q5VVC0 180 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 UNQ9165/PRO28630Q6UXU0 137 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 LINC00336Q6ZUF6 198 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 CEACAM19Q7Z692 300 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 KIR2DL5AQ8N109 375 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 OR2C3Q8N628 320 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 TEX45Q8NA69 505 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 ZNF485Q8NCK3 441 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 KIR2DL5BQ8NHK3 375 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 TM2D1Q9BX74 207 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 TMEM59Q9BXS4 323 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 OR2D2Q9H210 308 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 ZNF430Q9H8G1 570 aaPredicted RBP8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 Q9N2K0 584 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 PLEKHJ1Q9NW61 149 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 GHRLQ9UBU3 117 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 FBXL7Q9UJT9 491 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 APLNQ9ULZ1 77 aa8.01□□□□□ -1.13
SMARCC1-205ENST00000483847 TRAV25A0A0B4J276 109 aa8□□□□□ -1.13
SMARCC1-205ENST00000483847 SOCS1O15524 211 aa8□□□□□ -1.13
SMARCC1-205ENST00000483847 CRYZL1O95825 349 aa8□□□□□ -1.13
SMARCC1-205ENST00000483847 DCKP27707 260 aa8□□□□□ -1.13
SMARCC1-205ENST00000483847 RTL8BQ17RB0 113 aa8□□□□□ -1.13
SMARCC1-205ENST00000483847 VMA21Q3ZAQ7 101 aa8□□□□□ -1.13
SMARCC1-205ENST00000483847 FAM106AQ4KMX7 169 aa8□□□□□ -1.13
SMARCC1-205ENST00000483847 ZNF585BQ52M93 769 aa8□□□□□ -1.13
SMARCC1-205ENST00000483847 FAM209BQ5JX69 171 aa8□□□□□ -1.13
SMARCC1-205ENST00000483847 RBPMS2Q6ZRY4 209 aaKnown RBP8□□□□□ -1.13
SMARCC1-205ENST00000483847 CBR4Q8N4T8 237 aa8□□□□□ -1.13
SMARCC1-205ENST00000483847 NKAIN3Q8N8D7 197 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms