RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 SPIN2BQ9BPZ2 258 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 FAM234AQ9H0X4 552 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 SLC25A10Q9UBX3 287 aaPredicted RBP7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 ABCA12Q86UK0 2595 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 A0A1B0GU03 582 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 A8MXK9 166 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 H3BP45 60 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 FBXO24O75426 580 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 P0C879 139 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 NFYBP25208 207 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 DUTP33316 252 aaKnown RBP7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 EWSR1Q01844 656 aaKnown RBP eCLIP7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 TMEM252Q8N6L7 170 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 RNASE11Q8TAA1 199 aaKnown RBP7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 TMEM204Q9BSN7 226 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 LYRM2Q9NU23 88 aaPredicted RBP7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 GFOD1Q9NXC2 390 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 PRELID3BQ9Y3B1 194 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 RFNGQ9Y644 331 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 TANC2Q9HCD6 1990 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 HCFC1P51610 2035 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 MALRD1Q5VYJ5 2156 aa7.28□□□□□ -1.24
CDC42SE1-204ENST00000483763 TRGV10A0A0A0MS01 117 aa7.27□□□□□ -1.24
CDC42SE1-204ENST00000483763 IGHV1-69-2A0A0G2JMI3 117 aa7.27□□□□□ -1.24
CDC42SE1-204ENST00000483763 KRBOX1C9JBD0 128 aa7.27□□□□□ -1.24
CDC42SE1-204ENST00000483763 TAAR5O14804 337 aa7.27□□□□□ -1.24
CDC42SE1-204ENST00000483763 GPR137BO60478 399 aa7.27□□□□□ -1.24
CDC42SE1-204ENST00000483763 CST7O76096 145 aa7.27□□□□□ -1.24
CDC42SE1-204ENST00000483763 CCL3L1P16619 93 aa7.27□□□□□ -1.24
CDC42SE1-204ENST00000483763 GPR12P47775 334 aa7.27□□□□□ -1.24
CDC42SE1-204ENST00000483763 GPR157Q5UAW9 335 aa7.27□□□□□ -1.24
CDC42SE1-204ENST00000483763 ITLN2Q8WWU7 325 aaPredicted RBP7.27□□□□□ -1.24
CDC42SE1-204ENST00000483763 EDARADDQ8WWZ3 215 aa7.27□□□□□ -1.24
CDC42SE1-204ENST00000483763 LINC00574Q9H8X3 128 aa7.27□□□□□ -1.24
CDC42SE1-204ENST00000483763 ZFP57Q9NU63 452 aa7.27□□□□□ -1.24
CDC42SE1-204ENST00000483763 DOCK11Q5JSL3 2073 aa7.27□□□□□ -1.25
CDC42SE1-204ENST00000483763 POLQO75417 2590 aa7.27□□□□□ -1.25
CDC42SE1-204ENST00000483763 WRBO00258 174 aa7.27□□□□□ -1.25
CDC42SE1-204ENST00000483763 SLC25A6P12236 298 aa7.27□□□□□ -1.25
CDC42SE1-204ENST00000483763 HOXA1P49639 335 aaPredicted RBP7.27□□□□□ -1.25
CDC42SE1-204ENST00000483763 RPL31P62899 125 aaKnown RBP7.27□□□□□ -1.25
CDC42SE1-204ENST00000483763 FLI1Q01543 452 aaPredicted RBP7.27□□□□□ -1.25
CDC42SE1-204ENST00000483763 CLINT1Q14677 625 aa7.27□□□□□ -1.25
CDC42SE1-204ENST00000483763 PRAMEF5Q5TYX0 476 aa7.27□□□□□ -1.25
CDC42SE1-204ENST00000483763 TMEM200BQ69YZ2 307 aa7.27□□□□□ -1.25
CDC42SE1-204ENST00000483763 C1orf87Q8N0U7 546 aa7.27□□□□□ -1.25
CDC42SE1-204ENST00000483763 TMEM217Q8N7C4 229 aa7.27□□□□□ -1.25
CDC42SE1-204ENST00000483763 CORO2AQ92828 525 aa7.27□□□□□ -1.25
CDC42SE1-204ENST00000483763 ZNF251Q9BRH9 671 aa7.27□□□□□ -1.25
CDC42SE1-204ENST00000483763 MAST4O15021 2626 aa7.27□□□□□ -1.25
CDC42SE1-204ENST00000483763 DOPEY1Q5JWR5 2465 aa7.27□□□□□ -1.25
CDC42SE1-204ENST00000483763 FBN2P35556 2912 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 SAA2-SAA4A0A096LPE2 208 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 RNF212BA8MTL3 300 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 M0R1X1 148 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 FGF16O43320 207 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 JTBO76095 146 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 GAPDHP04406 335 aaKnown RBP7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 SOD3P08294 240 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 SAA2P0DJI9 122 aaPredicted RBP7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 GNG10P50151 68 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 VKORC1L1Q8N0U8 176 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 UBAC2Q8NBM4 344 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 ZNF439Q8NDP4 499 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 OR1S2Q8NGQ3 325 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 HSD17B10Q99714 261 aaKnown RBP7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 ABHD14AQ9BUJ0 271 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 SH3BGRL3Q9H299 93 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 MMP24Q9Y5R2 645 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 DMRT1Q9Y5R6 373 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 DVL1O14640 695 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 FCGR3BO75015 233 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 IAPPP10997 89 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 CATR1Q13166 79 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 MSMO1Q15800 293 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 MIDNQ504T8 468 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 ZNF66Q6ZN08 573 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 OR5C1Q8NGR4 320 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 ARV1Q9H2C2 271 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 MED13LQ71F56 2210 aa7.26□□□□□ -1.25
CDC42SE1-204ENST00000483763 hADV38S2A0JD32 116 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 NKX6-3A6NJ46 265 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 ZNF729A6NN14 1252 aaPredicted RBP7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 MARCH11A6NNE9 402 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 C19orf84I3L1E1 186 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 SYNGR2O43760 224 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 FGF2P09038 288 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 FHITP49789 147 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 HFEQ30201 348 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 LYG1Q8N1E2 194 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 EIF4E3Q8N5X7 224 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 HSD17B11Q8NBQ5 300 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 RNF141Q8WVD5 230 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 DDB2Q92466 427 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 IDI2-AS1Q9NZ38 188 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 RPUSD1Q9UJJ7 312 aaKnown RBP7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 LINC00312Q9Y6C7 94 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 ZNF705EA8MWA4 302 aaPredicted RBP7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 TXNL1O43396 289 aa7.25□□□□□ -1.25
CDC42SE1-204ENST00000483763 PVALBP20472 110 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms