RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 GRPRP30550 384 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 RAB8AP61006 207 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 DYNLL1P63167 89 aaKnown RBP2.33□□□□□ -2.04
SF3B1-210ENST00000482158 CST6Q15828 149 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 TCF23Q7RTU1 214 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 FAM19A5Q7Z5A7 132 aaPredicted RBP2.33□□□□□ -2.04
SF3B1-210ENST00000482158 CLDN22Q8N7P3 220 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 TMEM161BQ8NDZ6 487 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 GPR32P1Q8NGA4 272 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 OR9I1Q8NGQ6 314 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 SPPL2BQ8TCT7 592 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 HAVCR2Q8TDQ0 301 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 HIST1H2BAQ96A08 127 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 TCEAL4Q96EI5 215 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 TMEM56Q96MV1 263 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 RBP7Q96R05 134 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 C11orf49Q9H6J7 331 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 SPANXB1Q9NS25 103 aaPredicted RBP2.33□□□□□ -2.04
SF3B1-210ENST00000482158 VPREB3Q9UKI3 123 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 RIMS1Q86UR5 1692 aaKnown RBP2.33□□□□□ -2.04
SF3B1-210ENST00000482158 ARHGEF10O15013 1369 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 CHD2O14647 1828 aaKnown RBP2.33□□□□□ -2.04
SF3B1-210ENST00000482158 CCDC144AA2RUR9 1427 aa2.33□□□□□ -2.04
SF3B1-210ENST00000482158 TRPM6Q9BX84 2022 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 LINC00587B1AMM8 73 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 DEDDO75618 318 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 SCGB1A1P11684 91 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 ALOX5APP20292 161 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 RPL5P46777 297 aaKnown RBP2.32□□□□□ -2.04
SF3B1-210ENST00000482158 DLX6P56179 175 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 FOXF1Q12946 379 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 OR2F1Q13607 317 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 C4orf26Q17RF5 130 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 ZNF181Q2M3W8 571 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 CST9Q5W186 159 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 C5orf46Q6UWT4 87 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 SLC36A1Q7Z2H8 476 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 OR10K1Q8NGX5 313 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 C16orf78Q8WTQ4 265 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 SFRP2Q96HF1 295 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 PHB2Q99623 299 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 SLC19A3Q9BZV2 496 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 BOLA2Q9H3K6 86 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 GLTPQ9NZD2 209 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 FBXO5Q9UKT4 447 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 HHLA2Q9UM44 414 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 TP53TG1Q9Y2A0 90 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 TMEM56-RWDD3S4R434 201 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 ZNF638Q14966 1978 aaKnown RBP2.32□□□□□ -2.04
SF3B1-210ENST00000482158 CNTLNQ9NXG0 1405 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 RIMS2Q9UQ26 1411 aa2.32□□□□□ -2.04
SF3B1-210ENST00000482158 TGIF2-C20orf24A0A0A6YYL0 155 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 OR6C6A6NF89 314 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 CLDN24A6NM45 220 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 C17orf98A8MV24 154 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 OR11H12B2RN74 326 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 OR2B3O76000 313 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 HAND1O96004 215 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 IFNGR2P38484 337 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 SRP9P49458 86 aaKnown RBP2.31□□□□□ -2.04
SF3B1-210ENST00000482158 TCL1AP56279 114 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 TAS2R41P59536 307 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 OR8G1Q15617 311 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 HLA-DRB5Q30154 266 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 DEFB115Q30KQ5 88 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 SPNS3Q6ZMD2 512 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 Q6ZRU5 148 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 LRRC25Q8N386 305 aaPredicted RBP2.31□□□□□ -2.04
SF3B1-210ENST00000482158 OR11H1Q8NG94 326 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 OR10P1Q8NGE3 313 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 OR11H2Q8NH07 326 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 ZNRF2Q8NHG8 242 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 RNASE11Q8TAA1 199 aaKnown RBP2.31□□□□□ -2.04
SF3B1-210ENST00000482158 CD200R1Q8TD46 325 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 TSC22D3Q99576 134 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 AIF1LQ9BQI0 150 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 MAP1LC3AQ9H492 121 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 OR52A1Q9UKL2 312 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 CCNB3Q8WWL7 1395 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 CRB1P82279 1406 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 KDM5BQ9UGL1 1544 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 BICRAQ9NZM4 1560 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 NAV1Q8NEY1 1877 aa2.31□□□□□ -2.04
SF3B1-210ENST00000482158 VPS37CA5D8V6 355 aaPredicted RBP2.3□□□□□ -2.04
SF3B1-210ENST00000482158 RFPL4AA6NLU0 287 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 RFPL4AL1F8VTS6 287 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 TSTD3H0UI37 97 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 SLC25A20O43772 301 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 APOC1P02654 83 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 F8A1P23610 371 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 RPL12P30050 165 aaKnown RBP2.3□□□□□ -2.04
SF3B1-210ENST00000482158 SULT1A1P50225 295 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 SULT1A2P50226 295 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 SNAP25P60880 206 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 PSG4Q00888 419 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 PAFAH1B3Q15102 231 aaKnown RBP2.3□□□□□ -2.04
SF3B1-210ENST00000482158 LRRC26Q2I0M4 334 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 LRRC75BQ2VPJ9 315 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 VN1R4Q7Z5H5 301 aa2.3□□□□□ -2.04
SF3B1-210ENST00000482158 ZNF676Q8N7Q3 588 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms