RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TRAPPC2LQ9UL33 140 aa9.55□□□□□ -0.88
HPS4-212ENST00000481910 POMT1Q9Y6A1 747 aa9.55□□□□□ -0.88
HPS4-212ENST00000481910 SEC14L6B5MCN3 397 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 RAMP3O60896 148 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 HLA-DQB1P01920 261 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 DLK1P80370 383 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 MEF2CQ06413 473 aaPredicted RBP9.54□□□□□ -0.88
HPS4-212ENST00000481910 TMEM200BQ69YZ2 307 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 TRAPPC6BQ86SZ2 158 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 ZFP82Q8N141 532 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 C8orf46Q8TAG6 207 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 CACNG8Q8WXS5 425 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 MSI2Q96DH6 328 aaKnown RBP9.54□□□□□ -0.88
HPS4-212ENST00000481910 SNHG12Q9BXW3 62 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 MMP28Q9H239 520 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 MMP26Q9NRE1 261 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 OR6C3Q9NZP0 311 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 POLR3KQ9Y2Y1 108 aaPredicted RBP9.54□□□□□ -0.88
HPS4-212ENST00000481910 ABCA2Q9BZC7 2435 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 ITPR3Q14573 2671 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 CREBBPQ92793 2442 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 TRGV10A0A0A0MS01 117 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 TRAV39A0A0B4J263 110 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 ENSAO43768 121 aaKnown RBP9.54□□□□□ -0.88
HPS4-212ENST00000481910 NAPSAO96009 420 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 TGFAP01135 160 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 IGHV4-31P0DP07 118 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 TBPP20226 339 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 MRPS10P82664 201 aaKnown RBP9.54□□□□□ -0.88
HPS4-212ENST00000481910 PITPNAQ00169 270 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 SURF2Q15527 256 aaPredicted RBP9.54□□□□□ -0.88
HPS4-212ENST00000481910 TRIQKQ629K1 86 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 FAM131AQ6UXB0 335 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 GAPTQ8N292 157 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 MRPL30Q8TCC3 161 aaKnown RBP9.54□□□□□ -0.88
HPS4-212ENST00000481910 NUDCD2Q8WVJ2 157 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 LPAR3Q9UBY5 353 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 TNFRSF18Q9Y5U5 241 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 LINC00312Q9Y6C7 94 aa9.54□□□□□ -0.88
HPS4-212ENST00000481910 IGHV2-70DA0A0C4DH43 119 aa9.53□□□□□ -0.88
HPS4-212ENST00000481910 KIR2DS1A0A191URI9 304 aa9.53□□□□□ -0.88
HPS4-212ENST00000481910 CFDP00746 253 aaPredicted RBP9.53□□□□□ -0.88
HPS4-212ENST00000481910 PRSS3P35030 304 aa9.53□□□□□ -0.88
HPS4-212ENST00000481910 GLP1RP43220 463 aa9.53□□□□□ -0.88
HPS4-212ENST00000481910 EIF5AP63241 154 aaKnown RBP9.53□□□□□ -0.88
HPS4-212ENST00000481910 PAX2Q02962 417 aa9.53□□□□□ -0.88
HPS4-212ENST00000481910 OPCMLQ14982 345 aa9.53□□□□□ -0.88
HPS4-212ENST00000481910 TCF24Q7RTU0 167 aa9.53□□□□□ -0.88
HPS4-212ENST00000481910 LY6G5BQ8NDX9 201 aa9.53□□□□□ -0.88
HPS4-212ENST00000481910 OR13A1Q8NGR1 328 aa9.53□□□□□ -0.88
HPS4-212ENST00000481910 C15orf40Q8WUR7 153 aa9.53□□□□□ -0.88
HPS4-212ENST00000481910 SMIM8Q96KF7 97 aa9.53□□□□□ -0.88
HPS4-212ENST00000481910 C18orf12Q96KH6 178 aa9.53□□□□□ -0.88
HPS4-212ENST00000481910 ABHD1Q96SE0 405 aa9.53□□□□□ -0.88
HPS4-212ENST00000481910 VCX2Q9H322 139 aa9.53□□□□□ -0.88
HPS4-212ENST00000481910 TBL2Q9Y4P3 447 aaKnown RBP9.53□□□□□ -0.88
HPS4-212ENST00000481910 ABCA1O95477 2261 aa9.53□□□□□ -0.88
HPS4-212ENST00000481910 GZMHP20718 246 aa9.52□□□□□ -0.88
HPS4-212ENST00000481910 ZNF616Q08AN1 781 aa9.52□□□□□ -0.88
HPS4-212ENST00000481910 GAMTQ14353 236 aa9.52□□□□□ -0.88
HPS4-212ENST00000481910 CCDC71LQ8N9Z2 235 aa9.52□□□□□ -0.88
HPS4-212ENST00000481910 OR10W1Q8NGF6 305 aa9.52□□□□□ -0.88
HPS4-212ENST00000481910 TMEM186Q96B77 213 aa9.52□□□□□ -0.88
HPS4-212ENST00000481910 ZNF714Q96N38 554 aa9.52□□□□□ -0.88
HPS4-212ENST00000481910 CITED1Q99966 193 aa9.52□□□□□ -0.88
HPS4-212ENST00000481910 ST6GALNAC5Q9BVH7 336 aa9.52□□□□□ -0.88
HPS4-212ENST00000481910 SUCNR1Q9BXA5 334 aa9.52□□□□□ -0.88
HPS4-212ENST00000481910 MED28Q9H204 178 aa9.52□□□□□ -0.88
HPS4-212ENST00000481910 KCNIP1Q9NZI2 227 aa9.52□□□□□ -0.88
HPS4-212ENST00000481910 ONECUT1Q9UBC0 465 aa9.52□□□□□ -0.88
HPS4-212ENST00000481910 ZNF230Q9UIE0 474 aaPredicted RBP9.52□□□□□ -0.88
HPS4-212ENST00000481910 UBE2J1Q9Y385 318 aaPredicted RBP9.52□□□□□ -0.88
HPS4-212ENST00000481910 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.52□□□□□ -0.882e-11■■■■■ 43
HPS4-212ENST00000481910 A0A1W2PPV4 95 aa9.52□□□□□ -0.89
HPS4-212ENST00000481910 CYB5BO43169 146 aa9.52□□□□□ -0.89
HPS4-212ENST00000481910 FCGR3AP08637 254 aa9.52□□□□□ -0.89
HPS4-212ENST00000481910 CCL3L1P16619 93 aa9.52□□□□□ -0.89
HPS4-212ENST00000481910 DCAF12L2Q5VW00 463 aa9.52□□□□□ -0.89
HPS4-212ENST00000481910 TCF23Q7RTU1 214 aa9.52□□□□□ -0.89
HPS4-212ENST00000481910 LYG2Q86SG7 212 aa9.52□□□□□ -0.89
HPS4-212ENST00000481910 GLCCI1Q86VQ1 547 aa9.52□□□□□ -0.89
HPS4-212ENST00000481910 ORAOV1Q8WV07 137 aa9.52□□□□□ -0.89
HPS4-212ENST00000481910 SOSTQ9BQB4 213 aa9.52□□□□□ -0.89
HPS4-212ENST00000481910 GINS4Q9BRT9 223 aa9.52□□□□□ -0.89
HPS4-212ENST00000481910 SLC5A7Q9GZV3 580 aa9.52□□□□□ -0.89
HPS4-212ENST00000481910 MBNL3Q9NUK0 354 aaKnown RBP9.52□□□□□ -0.89
HPS4-212ENST00000481910 INSIG2Q9Y5U4 225 aa9.52□□□□□ -0.89
HPS4-212ENST00000481910 TRBV6-6A0A0A6YYG2 114 aa9.51□□□□□ -0.89
HPS4-212ENST00000481910 TRAV34A0A0B4J273 112 aa9.51□□□□□ -0.89
HPS4-212ENST00000481910 MEIS3P1A6NDR6 274 aa9.51□□□□□ -0.89
HPS4-212ENST00000481910 ZNF728P0DKX0 622 aa9.51□□□□□ -0.89
HPS4-212ENST00000481910 CD99P14209 185 aa9.51□□□□□ -0.89
HPS4-212ENST00000481910 DVL1P1P54792 670 aaPredicted RBP9.51□□□□□ -0.89
HPS4-212ENST00000481910 CR1LQ2VPA4 569 aa9.51□□□□□ -0.89
HPS4-212ENST00000481910 Q6ZPA2 131 aa9.51□□□□□ -0.89
HPS4-212ENST00000481910 OR1S1Q8NH92 325 aa9.51□□□□□ -0.89
HPS4-212ENST00000481910 CXorf58Q96LI9 332 aa9.51□□□□□ -0.89
HPS4-212ENST00000481910 Q9N2K0 584 aa9.51□□□□□ -0.89
HPS4-212ENST00000481910 SLC2A9Q9NRM0 540 aa9.51□□□□□ -0.89
HPS4-212ENST00000481910 V9GYH0 126 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms