RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 LGALS7P47929 136 aa14.25□□□□□ -0.13
CLK1-211ENST00000481641 TMEM177Q53S58 311 aa14.25□□□□□ -0.13
CLK1-211ENST00000481641 RAB26Q9ULW5 256 aa14.25□□□□□ -0.13
CLK1-211ENST00000481641 TNCP24821 2201 aa14.25□□□□□ -0.13
CLK1-211ENST00000481641 C13orf42A0A1B0GVH6 325 aa14.24□□□□□ -0.13
CLK1-211ENST00000481641 METTL21EPA6NDL7 271 aa14.24□□□□□ -0.13
CLK1-211ENST00000481641 LINC00473A8K010 186 aa14.24□□□□□ -0.13
CLK1-211ENST00000481641 CDNFQ49AH0 187 aa14.24□□□□□ -0.13
CLK1-211ENST00000481641 H1FOOQ8IZA3 346 aaPredicted RBP14.24□□□□□ -0.13
CLK1-211ENST00000481641 OR6Q1Q8NGQ2 317 aa14.24□□□□□ -0.13
CLK1-211ENST00000481641 OR4C12Q96R67 309 aa14.24□□□□□ -0.13
CLK1-211ENST00000481641 PSMB9P28065 219 aa14.23□□□□□ -0.13
CLK1-211ENST00000481641 DUTP33316 252 aaKnown RBP14.23□□□□□ -0.13
CLK1-211ENST00000481641 SRSF7Q16629 238 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLK1-211ENST00000481641 RTL8BQ17RB0 113 aa14.23□□□□□ -0.13
CLK1-211ENST00000481641 IDO2Q6ZQW0 420 aa14.23□□□□□ -0.13
CLK1-211ENST00000481641 DDB2Q92466 427 aa14.23□□□□□ -0.13
CLK1-211ENST00000481641 RSRP1Q9BUV0 290 aa14.23□□□□□ -0.13
CLK1-211ENST00000481641 ST6GALNAC5Q9BVH7 336 aa14.23□□□□□ -0.13
CLK1-211ENST00000481641 H3BUA1 57 aa14.22□□□□□ -0.13
CLK1-211ENST00000481641 RBMXL2O75526 392 aaKnown RBP14.22□□□□□ -0.13
CLK1-211ENST00000481641 DIRAS3O95661 229 aa14.22□□□□□ -0.13
CLK1-211ENST00000481641 CRYZL1O95825 349 aa14.22□□□□□ -0.13
CLK1-211ENST00000481641 FRMD6-AS1P0C7T7 363 aa14.22□□□□□ -0.13
CLK1-211ENST00000481641 GABARAPL2P60520 117 aa14.22□□□□□ -0.13
CLK1-211ENST00000481641 CBX3Q13185 183 aa14.22□□□□□ -0.13
CLK1-211ENST00000481641 UBE2UQ5VVX9 321 aa14.22□□□□□ -0.13
CLK1-211ENST00000481641 Q6ZS49 121 aa14.22□□□□□ -0.13
CLK1-211ENST00000481641 SPARTQ8N0X7 666 aa14.22□□□□□ -0.13
CLK1-211ENST00000481641 RANGRFQ9HD47 186 aaPredicted RBP14.22□□□□□ -0.13
CLK1-211ENST00000481641 TXNL4BQ9NX01 149 aaKnown RBP14.22□□□□□ -0.13
CLK1-211ENST00000481641 COA4Q9NYJ1 87 aa14.22□□□□□ -0.13
CLK1-211ENST00000481641 ADAM30Q9UKF2 790 aa14.22□□□□□ -0.13
CLK1-211ENST00000481641 MSGN1A6NI15 193 aa14.21□□□□□ -0.13
CLK1-211ENST00000481641 TRBV12-3P01733 135 aa14.21□□□□□ -0.13
CLK1-211ENST00000481641 RRASP10301 218 aa14.21□□□□□ -0.13
CLK1-211ENST00000481641 GALP22466 123 aa14.21□□□□□ -0.13
CLK1-211ENST00000481641 NFYAP23511 347 aaPredicted RBP14.21□□□□□ -0.13
CLK1-211ENST00000481641 TAGLNQ01995 201 aaKnown RBP14.21□□□□□ -0.13
CLK1-211ENST00000481641 TNXAQ16473 311 aa14.21□□□□□ -0.13
CLK1-211ENST00000481641 NUDCD2Q8WVJ2 157 aa14.21□□□□□ -0.13
CLK1-211ENST00000481641 PHB2Q99623 299 aa14.21□□□□□ -0.13
CLK1-211ENST00000481641 ELOVL1Q9BW60 279 aa14.21□□□□□ -0.13
CLK1-211ENST00000481641 TINAGL1Q9GZM7 467 aaPredicted RBP14.21□□□□□ -0.13
CLK1-211ENST00000481641 A0A0G2JLM5 398 aa14.2□□□□□ -0.14
CLK1-211ENST00000481641 NOTOA8MTQ0 251 aa14.2□□□□□ -0.14
CLK1-211ENST00000481641 DTYMKP23919 212 aa14.2□□□□□ -0.14
CLK1-211ENST00000481641 UBE2KP61086 200 aa14.2□□□□□ -0.14
CLK1-211ENST00000481641 DYRK1AQ13627 763 aa14.2□□□□□ -0.14
CLK1-211ENST00000481641 PRSS8Q16651 343 aa14.2□□□□□ -0.14
CLK1-211ENST00000481641 VMA21Q3ZAQ7 101 aa14.2□□□□□ -0.14
CLK1-211ENST00000481641 ADTRPQ96IZ2 230 aa14.2□□□□□ -0.14
CLK1-211ENST00000481641 DAPK2Q9UIK4 370 aa14.2□□□□□ -0.14
CLK1-211ENST00000481641 STUB1Q9UNE7 303 aa14.2□□□□□ -0.14
CLK1-211ENST00000481641 TMEM235A6NFC5 223 aa14.19□□□□□ -0.14
CLK1-211ENST00000481641 MRPS14O60783 128 aaKnown RBP14.19□□□□□ -0.14
CLK1-211ENST00000481641 ATP6V1G2O95670 118 aa14.19□□□□□ -0.14
CLK1-211ENST00000481641 IGLV1-51P01701 117 aa14.19□□□□□ -0.14
CLK1-211ENST00000481641 PRH1P02810 166 aa14.19□□□□□ -0.14
CLK1-211ENST00000481641 ZP3P21754 424 aa14.19□□□□□ -0.14
CLK1-211ENST00000481641 SYNJ2BPP57105 145 aa14.19□□□□□ -0.14
CLK1-211ENST00000481641 KLF5Q13887 457 aaPredicted RBP14.19□□□□□ -0.14
CLK1-211ENST00000481641 OR2B11Q5JQS5 317 aa14.19□□□□□ -0.14
CLK1-211ENST00000481641 HACD4Q5VWC8 232 aa14.19□□□□□ -0.14
CLK1-211ENST00000481641 ANKRD13BQ86YJ7 626 aa14.19□□□□□ -0.14
CLK1-211ENST00000481641 TEX45Q8NA69 505 aa14.19□□□□□ -0.14
CLK1-211ENST00000481641 ACOT12Q8WYK0 555 aa14.19□□□□□ -0.14
CLK1-211ENST00000481641 TMEM68Q96MH6 324 aa14.19□□□□□ -0.14
CLK1-211ENST00000481641 RCHY1Q96PM5 261 aa14.19□□□□□ -0.14
CLK1-211ENST00000481641 RRP15Q9Y3B9 282 aaKnown RBP14.19□□□□□ -0.14
CLK1-211ENST00000481641 IGKV1D-13A0A0B4J2D9 117 aa14.18□□□□□ -0.14
CLK1-211ENST00000481641 SSX5O60225 188 aa14.18□□□□□ -0.14
CLK1-211ENST00000481641 FCGR3BO75015 233 aa14.18□□□□□ -0.14
CLK1-211ENST00000481641 CLEC2LP0C7M8 214 aa14.18□□□□□ -0.14
CLK1-211ENST00000481641 IGKV1-13P0DP09 117 aa14.18□□□□□ -0.14
CLK1-211ENST00000481641 FGF9P31371 208 aaPredicted RBP14.18□□□□□ -0.14
CLK1-211ENST00000481641 RPL30P62888 115 aaKnown RBP14.18□□□□□ -0.14
CLK1-211ENST00000481641 IL34Q6ZMJ4 242 aa14.18□□□□□ -0.14
CLK1-211ENST00000481641 Q8N1Y9 231 aa14.18□□□□□ -0.14
CLK1-211ENST00000481641 ZNF645Q8N7E2 425 aa14.18□□□□□ -0.14
CLK1-211ENST00000481641 ADAD2Q8NCV1 583 aaKnown RBP14.18□□□□□ -0.14
CLK1-211ENST00000481641 SRSF12Q8WXF0 261 aaKnown RBP14.18□□□□□ -0.14
CLK1-211ENST00000481641 OR51E2Q9H255 320 aa14.18□□□□□ -0.14
CLK1-211ENST00000481641 RNF167Q9H6Y7 350 aa14.18□□□□□ -0.14
CLK1-211ENST00000481641 ZNF430Q9H8G1 570 aaPredicted RBP14.18□□□□□ -0.14
CLK1-211ENST00000481641 PEF1Q9UBV8 284 aaKnown RBP14.18□□□□□ -0.14
CLK1-211ENST00000481641 OR2W1Q9Y3N9 320 aa14.18□□□□□ -0.14
CLK1-211ENST00000481641 DNAH7Q8WXX0 4024 aa14.17□□□□□ -0.14
CLK1-211ENST00000481641 TUSC2O75896 110 aa14.17□□□□□ -0.14
CLK1-211ENST00000481641 IGLV2-14P01704 120 aa14.17□□□□□ -0.14
CLK1-211ENST00000481641 HLA-DQB1P01920 261 aa14.17□□□□□ -0.14
CLK1-211ENST00000481641 SAA1P0DJI8 122 aaPredicted RBP14.17□□□□□ -0.14
CLK1-211ENST00000481641 ARL6IP1Q15041 203 aa14.17□□□□□ -0.14
CLK1-211ENST00000481641 C10orf55Q5SWW7 151 aa14.17□□□□□ -0.14
CLK1-211ENST00000481641 ZNF343Q6P1L6 599 aa14.17□□□□□ -0.14
CLK1-211ENST00000481641 OR9G4Q8NGQ1 327 aa14.17□□□□□ -0.14
CLK1-211ENST00000481641 OSR1Q8TAX0 266 aaPredicted RBP14.17□□□□□ -0.14
CLK1-211ENST00000481641 LGALS14Q8TCE9 139 aa14.17□□□□□ -0.14
CLK1-211ENST00000481641 DCUN1D5Q9BTE7 237 aa14.17□□□□□ -0.14
CLK1-211ENST00000481641 MPPED1O15442 326 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms