RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 OTOFQ9HC10 1997 aa3.16□□□□□ -1.9
COPA-203ENST00000481040 RPL36A-HNRNPH2H7BZ11 118 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 PGRMC1O00264 195 aaKnown RBP3.15□□□□□ -1.91
COPA-203ENST00000481040 SLC25A20O43772 301 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 OR7C1O76099 320 aaPredicted RBP3.15□□□□□ -1.91
COPA-203ENST00000481040 OR4E1P0C645 316 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 ATP6V0CP27449 155 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 TAS2R45P59539 299 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 RPL19P84098 196 aaKnown RBP3.15□□□□□ -1.91
COPA-203ENST00000481040 EIF4EBP1Q13541 118 aaPredicted RBP3.15□□□□□ -1.91
COPA-203ENST00000481040 MRPL51Q4U2R6 128 aaKnown RBP3.15□□□□□ -1.91
COPA-203ENST00000481040 LYZL2Q7Z4W2 148 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 TMED4Q7Z7H5 227 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 SLC35F6Q8N357 371 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 ZNF709Q8N972 641 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 ZNF680Q8NEM1 530 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 NEK7Q8TDX7 302 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 KLK6Q92876 244 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 C12orf43Q96C57 262 aaKnown RBP3.15□□□□□ -1.91
COPA-203ENST00000481040 CYYR1Q96J86 154 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 CNBD2Q96M20 576 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 V9GYQ6 96 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 PIK3C2GO75747 1445 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 ZNF532Q9HCE3 1301 aa3.15□□□□□ -1.91
COPA-203ENST00000481040 MTUS2Q5JR59 1369 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 DHX57Q6P158 1386 aaKnown RBP3.14□□□□□ -1.91
COPA-203ENST00000481040 CRB1P82279 1406 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 OR4C46A6NHA9 309 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 KNCNA6PVL3 124 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 COX7A2LO14548 114 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 IGHV3-53P01767 116 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 PFN1P07737 140 aaKnown RBP3.14□□□□□ -1.91
COPA-203ENST00000481040 CRABP1P29762 137 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 RPL5P46777 297 aaKnown RBP3.14□□□□□ -1.91
COPA-203ENST00000481040 PYCR3Q53H96 274 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 SCXQ7RTU7 201 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 ZNF664Q8N3J9 261 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 SLC22A24Q8N4F4 322 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 OR4K13Q8NH42 304 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 RAB2BQ8WUD1 216 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 SCRT1Q9BWW7 348 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 NKX6-2Q9C056 277 aaPredicted RBP3.14□□□□□ -1.91
COPA-203ENST00000481040 GPR84Q9NQS5 396 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 ARMC1Q9NVT9 282 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 TAAR3PQ9P1P4 343 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 ANGPT4Q9Y264 503 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 ZNF835Q9Y2P0 537 aa3.14□□□□□ -1.91
COPA-203ENST00000481040 FAM32AQ9Y421 112 aaKnown RBP3.14□□□□□ -1.91
COPA-203ENST00000481040 DICER1Q9UPY3 1922 aaKnown RBP3.14□□□□□ -1.91
COPA-203ENST00000481040 IGKV1D-37A0A075B6S9 117 aa3.13□□□□□ -1.91
COPA-203ENST00000481040 FAM236DA0A1B0GTK5 79 aa3.13□□□□□ -1.91
COPA-203ENST00000481040 TMEM150BA6NC51 233 aa3.13□□□□□ -1.91
COPA-203ENST00000481040 FAM159BA6NKW6 160 aa3.13□□□□□ -1.91
COPA-203ENST00000481040 FAAHO00519 579 aa3.13□□□□□ -1.91
COPA-203ENST00000481040 INAFM2P0DMQ5 153 aa3.13□□□□□ -1.91
COPA-203ENST00000481040 FAM236CP0DP71 79 aa3.13□□□□□ -1.91
COPA-203ENST00000481040 KLF3P57682 345 aaPredicted RBP3.13□□□□□ -1.91
COPA-203ENST00000481040 SNRPD2P62316 118 aaKnown RBP3.13□□□□□ -1.91
COPA-203ENST00000481040 CAV1Q03135 178 aa3.13□□□□□ -1.91
COPA-203ENST00000481040 KCNJ8Q15842 424 aa3.13□□□□□ -1.91
COPA-203ENST00000481040 IAH1Q2TAA2 248 aaPredicted RBP3.13□□□□□ -1.91
COPA-203ENST00000481040 SPINT4Q6UDR6 99 aa3.13□□□□□ -1.91
COPA-203ENST00000481040 SLC36A1Q7Z2H8 476 aa3.13□□□□□ -1.91
COPA-203ENST00000481040 NIPSNAP1Q9BPW8 284 aa3.13□□□□□ -1.91
COPA-203ENST00000481040 HOPXQ9BPY8 73 aaPredicted RBP3.13□□□□□ -1.91
COPA-203ENST00000481040 ENY2Q9NPA8 101 aa3.13□□□□□ -1.91
COPA-203ENST00000481040 NLRC5Q86WI3 1866 aa3.13□□□□□ -1.91
COPA-203ENST00000481040 SLIT3O75094 1523 aa3.13□□□□□ -1.91
COPA-203ENST00000481040 A0A1B0GVY2 172 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 C2orf74A8MZ97 194 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 LST1O00453 97 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 KLRC4O43908 158 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 PDE6DO43924 150 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 HLA-DRB1P01911 266 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 IGHV3-30-3P0DP02 117 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 ZNF140P52738 457 aaPredicted RBP3.12□□□□□ -1.91
COPA-203ENST00000481040 TSPEAR-AS2P59090 65 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 POLR2GP62487 172 aaKnown RBP eCLIP3.12□□□□□ -1.91
COPA-203ENST00000481040 POU6F1Q14863 301 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 ZFAND6Q6FIF0 208 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 GPHB5Q86YW7 130 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 OR8B12Q8NGG6 310 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 OR51A2Q8NGJ7 313 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 SGMS2Q8NHU3 365 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 MCFD2Q8NI22 146 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 C14orf105Q9NVL8 296 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 OPTCQ9UBM4 332 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 AK3Q9UIJ7 227 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 ZNF443Q9Y2A4 671 aaPredicted RBP3.12□□□□□ -1.91
COPA-203ENST00000481040 ZNF638Q14966 1978 aaKnown RBP3.12□□□□□ -1.91
COPA-203ENST00000481040 ADAMTSL1Q8N6G6 1762 aa3.12□□□□□ -1.91
COPA-203ENST00000481040 TRAV26-2A0A0B4J265 109 aa3.11□□□□□ -1.91
COPA-203ENST00000481040 hADV38S2A0JD32 116 aa3.11□□□□□ -1.91
COPA-203ENST00000481040 A8MUN3 132 aa3.11□□□□□ -1.91
COPA-203ENST00000481040 A8MWP6 167 aa3.11□□□□□ -1.91
COPA-203ENST00000481040 SERPINA7P05543 415 aa3.11□□□□□ -1.91
COPA-203ENST00000481040 CRYGDP07320 174 aa3.11□□□□□ -1.91
COPA-203ENST00000481040 ZNF286BP0CG31 522 aa3.11□□□□□ -1.91
COPA-203ENST00000481040 CYBAP13498 195 aa3.11□□□□□ -1.91
COPA-203ENST00000481040 NPPCP23582 126 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms