RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TNXAQ16473 311 aa17.87■□□□□ 0.45
SDF4-206ENST00000478938 TRIM61Q5EBN2 209 aa17.87■□□□□ 0.45
SDF4-206ENST00000478938 DCAF12Q5T6F0 453 aa17.87■□□□□ 0.45
SDF4-206ENST00000478938 LMX1AQ8TE12 382 aa17.87■□□□□ 0.45
SDF4-206ENST00000478938 LSM10Q969L4 123 aaKnown RBP17.87■□□□□ 0.45
SDF4-206ENST00000478938 MMP17Q9ULZ9 603 aa17.87■□□□□ 0.45
SDF4-206ENST00000478938 V9GYV3 84 aa17.87■□□□□ 0.45
SDF4-206ENST00000478938 M0R296 226 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 UBE2G1P62253 170 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 DEFB103AP81534 67 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 TBR1Q16650 682 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 GJC3Q8NFK1 279 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 STRADBQ9C0K7 418 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 CHODLQ9H9P2 273 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 CLDN14O95500 239 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 MT-ND6P03923 174 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 S100GP29377 79 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 MRPL54Q6P161 138 aaKnown RBP17.86■□□□□ 0.45
SDF4-206ENST00000478938 SLC37A2Q8TED4 501 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.86■□□□□ 0.45
SDF4-206ENST00000478938 ST8SIA1Q92185 356 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 HES4Q9HCC6 221 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 GPR27Q9NS67 375 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 GAGE10A6NGK3 116 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 C22orf46C9J442 243 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 PHYHD1Q5SRE7 291 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 WDR73Q6P4I2 378 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 OR8B3Q8NGG8 313 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 OR8B2Q96RD0 313 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 PLEK2Q9NYT0 353 aa17.86■□□□□ 0.45
SDF4-206ENST00000478938 PEF1Q9UBV8 284 aaKnown RBP17.86■□□□□ 0.45
SDF4-206ENST00000478938 hDV102S1A0JD36 115 aa17.85■□□□□ 0.45
SDF4-206ENST00000478938 TMEM150CB9EJG8 249 aa17.85■□□□□ 0.45
SDF4-206ENST00000478938 M0R2Z0 102 aa17.85■□□□□ 0.45
SDF4-206ENST00000478938 CELA2BP08218 269 aaPredicted RBP17.85■□□□□ 0.45
SDF4-206ENST00000478938 CHRDL1Q9BU40 450 aa17.85■□□□□ 0.45
SDF4-206ENST00000478938 FNDC4Q9H6D8 234 aaPredicted RBP17.85■□□□□ 0.45
SDF4-206ENST00000478938 PPP1R3CQ9UQK1 317 aa17.85■□□□□ 0.45
SDF4-206ENST00000478938 CD5LO43866 347 aa17.84■□□□□ 0.45
SDF4-206ENST00000478938 ARL14EPLP0DKL9 152 aa17.84■□□□□ 0.45
SDF4-206ENST00000478938 OTX1P32242 354 aaPredicted RBP17.84■□□□□ 0.45
SDF4-206ENST00000478938 C18orf32Q8TCD1 76 aa17.84■□□□□ 0.45
SDF4-206ENST00000478938 HS3ST6Q96QI5 342 aa17.84■□□□□ 0.45
SDF4-206ENST00000478938 ARL2-SNX15V9GYD0 113 aa17.84■□□□□ 0.45
SDF4-206ENST00000478938 LRP5LA4QPB2 252 aa17.84■□□□□ 0.45
SDF4-206ENST00000478938 HSBP1O75506 76 aa17.84■□□□□ 0.45
SDF4-206ENST00000478938 TNFSF15O95150 251 aa17.84■□□□□ 0.45
SDF4-206ENST00000478938 CX3CL1P78423 397 aa17.84■□□□□ 0.45
SDF4-206ENST00000478938 FXYD3Q14802 87 aa17.84■□□□□ 0.45
SDF4-206ENST00000478938 PCSK4Q6UW60 755 aa17.84■□□□□ 0.45
SDF4-206ENST00000478938 TMEM92Q6UXU6 159 aa17.84■□□□□ 0.45
SDF4-206ENST00000478938 Q6ZS49 121 aa17.84■□□□□ 0.45
SDF4-206ENST00000478938 ZNF296Q8WUU4 475 aaPredicted RBP17.84■□□□□ 0.45
SDF4-206ENST00000478938 CLEC5AQ9NY25 188 aa17.84■□□□□ 0.45
SDF4-206ENST00000478938 C2orf70A6NJV1 201 aa17.83■□□□□ 0.44
SDF4-206ENST00000478938 J3QR06 171 aa17.83■□□□□ 0.44
SDF4-206ENST00000478938 LINC00869P0C866 280 aa17.83■□□□□ 0.44
SDF4-206ENST00000478938 EDDM3BP56851 147 aa17.83■□□□□ 0.44
SDF4-206ENST00000478938 RPL31P62899 125 aaKnown RBP17.83■□□□□ 0.44
SDF4-206ENST00000478938 C12orf54Q6X4T0 127 aa17.83■□□□□ 0.44
SDF4-206ENST00000478938 ABI3Q9P2A4 366 aa17.83■□□□□ 0.44
SDF4-206ENST00000478938 YTHDF2Q9Y5A9 579 aaKnown RBP17.83■□□□□ 0.44
SDF4-206ENST00000478938 A0A087X0K7 114 aa17.83■□□□□ 0.44
SDF4-206ENST00000478938 GUCA1AP43080 201 aaPredicted RBP17.83■□□□□ 0.44
SDF4-206ENST00000478938 GPR6P46095 362 aaPredicted RBP17.83■□□□□ 0.44
SDF4-206ENST00000478938 ZNF585BQ52M93 769 aa17.83■□□□□ 0.44
SDF4-206ENST00000478938 IL36RNQ9UBH0 155 aa17.83■□□□□ 0.44
SDF4-206ENST00000478938 OR4C46A6NHA9 309 aa17.82■□□□□ 0.44
SDF4-206ENST00000478938 COL8A2P25067 703 aa17.82■□□□□ 0.44
SDF4-206ENST00000478938 HLA-BQ31612 363 aa17.82■□□□□ 0.44
SDF4-206ENST00000478938 UFSP1Q6NVU6 142 aa17.82■□□□□ 0.44
SDF4-206ENST00000478938 UBALD2Q8IYN6 164 aa17.82■□□□□ 0.44
SDF4-206ENST00000478938 SCCPDHQ8NBX0 429 aa17.82■□□□□ 0.44
SDF4-206ENST00000478938 NINJ1Q92982 152 aa17.82■□□□□ 0.44
SDF4-206ENST00000478938 A0A1W2PPV4 95 aa17.82■□□□□ 0.44
SDF4-206ENST00000478938 FAM231BA6NCW3 169 aa17.82■□□□□ 0.44
SDF4-206ENST00000478938 RRHO14718 337 aa17.82■□□□□ 0.44
SDF4-206ENST00000478938 ZNF542PQ5EBM4 170 aa17.82■□□□□ 0.44
SDF4-206ENST00000478938 SLC25A34Q6PIV7 304 aa17.82■□□□□ 0.44
SDF4-206ENST00000478938 ZNF611Q8N823 705 aa17.82■□□□□ 0.44
SDF4-206ENST00000478938 OR1F12Q8NHA8 337 aa17.82■□□□□ 0.44
SDF4-206ENST00000478938 C19orf25Q9UFG5 118 aaPredicted RBP17.82■□□□□ 0.44
SDF4-206ENST00000478938 OR2W1Q9Y3N9 320 aa17.82■□□□□ 0.44
SDF4-206ENST00000478938 C7orf71A4D174 169 aa17.81■□□□□ 0.44
SDF4-206ENST00000478938 PMS2P5A8MQ11 134 aa17.81■□□□□ 0.44
SDF4-206ENST00000478938 OR10G3Q8NGC4 313 aa17.81■□□□□ 0.44
SDF4-206ENST00000478938 SLC25A40Q8TBP6 338 aa17.81■□□□□ 0.44
SDF4-206ENST00000478938 EAF1Q96JC9 268 aaPredicted RBP17.81■□□□□ 0.44
SDF4-206ENST00000478938 NPVFQ9HCQ7 196 aa17.81■□□□□ 0.44
SDF4-206ENST00000478938 PILRBQ9UKJ0 227 aa17.81■□□□□ 0.44
SDF4-206ENST00000478938 APCSP02743 223 aa17.81■□□□□ 0.44
SDF4-206ENST00000478938 SLAQ13239 276 aa17.81■□□□□ 0.44
SDF4-206ENST00000478938 SPTSSAQ969W0 71 aa17.81■□□□□ 0.44
SDF4-206ENST00000478938 VWCEQ96DN2 955 aa17.81■□□□□ 0.44
SDF4-206ENST00000478938 RNASE7Q9H1E1 156 aaKnown RBP17.81■□□□□ 0.44
SDF4-206ENST00000478938 ST20Q9HBF5 79 aa17.81■□□□□ 0.44
SDF4-206ENST00000478938 DEPPQ9NTK1 212 aa17.81■□□□□ 0.44
SDF4-206ENST00000478938 KIR2DS1A0A191URI9 304 aa17.8■□□□□ 0.44
SDF4-206ENST00000478938 AMY1AP04745 511 aa17.8■□□□□ 0.44
SDF4-206ENST00000478938 KIR2DS4P43632 304 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms