RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 HLA-DPB1P04440 258 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 TSPAN19P0C672 248 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 TLX1NBP0CAT3 122 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 DUX4L2P0CJ85 424 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 DUX4L3P0CJ86 424 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 DUX4L5P0CJ88 424 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 DUX4L6P0CJ89 424 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 DUX4L7P0CJ90 424 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 GRPRP30550 384 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 RBM34P42696 430 aaKnown RBP2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 CSNK1A1P48729 337 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 NUDT2P50583 147 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 GZMMP51124 257 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 MTPNP58546 118 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 PSME3P61289 254 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 BSPH1Q075Z2 132 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 ERCC8Q13216 396 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 OR1Q1Q15612 314 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 RGS21Q2M5E4 152 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 CHRFAM7AQ494W8 412 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 OR52W1Q6IF63 320 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 TTC33Q6PID6 262 aaPredicted RBP2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 ZNF773Q6PK81 442 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 ARL9Q6T311 187 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 AAED1Q7RTV5 226 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 DPPA2Q7Z7J5 298 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 DHFR2Q86XF0 187 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 C10orf111Q8N326 155 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 ATP6V1C2Q8NEY4 427 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 GPR32P1Q8NGA4 272 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 OR5J2Q8NH18 312 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 OR52E5Q8NH55 327 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 C17orf50Q8WW18 174 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 MAL2Q969L2 176 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 TMEM230Q96A57 120 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 EEF1AKMT3Q96AZ1 226 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 ISOC1Q96CN7 298 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 OPALINQ96PE5 141 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 DHRS9Q9BPW9 319 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 C1orf198Q9H425 327 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 SAV1Q9H4B6 383 aaPredicted RBP2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 ZNF442Q9H7R0 627 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 TMEM27Q9HBJ8 222 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 MYOZ1Q9NP98 299 aaPredicted RBP2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 DIABLOQ9NR28 239 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 CBLN4Q9NTU7 201 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 MRPL22Q9NWU5 206 aaKnown RBP2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 USE1Q9NZ43 259 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 PEF1Q9UBV8 284 aaKnown RBP2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 DUX4Q9UBX2 424 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 ZNF229Q9UJW7 825 aa2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 FAM32AQ9Y421 112 aaKnown RBP2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 FN1P02751 2386 aaKnown RBP2.49□□□□□ -2.01
CDC42BPA-212ENST00000478573 IGLV1-50A0A075B6I6 118 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 PNMA8CA0A1B0GUJ8 204 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 A0A1B0GVG6 124 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 DHRS12A0PJE2 317 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 DPRXA6NFQ7 191 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 CCDC160A6NGH7 325 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 NCBP2LA6PVI3 153 aaKnown RBP2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 ZNF99A8MXY4 864 aaPredicted RBP2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 H3BSA7 217 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 TEX46H3BTG2 121 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 L7N2F9 121 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 NDUFS8O00217 210 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 TPST1O60507 370 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 FCN3O75636 299 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 SNAPC5O75971 98 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 UBL3O95164 117 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 IFNA14P01570 189 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 OPN1SWP03999 348 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 ASAH2BP0C7U1 165 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 OCM2P0CE71 109 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 OCMP0CE72 109 aaPredicted RBP2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 TRAPPC2P0DI81 140 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 TRAPPC2BP0DI82 140 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 IGHV1-8P0DP01 117 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 SLC25A16P16260 332 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 CEACAM3P40198 252 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 PPOXP50336 477 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 ATP5J2P56134 94 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 RPS23P62266 143 aaKnown RBP2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 TSC22D1Q15714 1073 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 CEACAM16Q2WEN9 425 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 C10orf128Q5T292 105 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 GPR107Q5VW38 600 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 PLCXD3Q63HM9 321 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 LPCAT4Q643R3 524 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 NANOGP8Q6NSW7 305 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 MBOAT2Q6ZWT7 520 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 HMGN2P46Q86SG4 172 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 COMTD1Q86VU5 262 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 CBLN2Q8IUK8 224 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 SAXO1Q8IYX7 474 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 FAM86B1Q8N7N1 296 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 ZFP41Q8N8Y5 198 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 ZIC4Q8N9L1 334 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 WFDC11Q8NEX6 87 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 OR52E2Q8NGJ4 325 aa2.48□□□□□ -2.01
CDC42BPA-212ENST00000478573 OR10A6Q8NH74 314 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms