RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ZDHHC22Q8N966 263 aa2.23□□□□□ -2.05
SMARCA1-204ENST00000478420 ZNF439Q8NDP4 499 aa2.23□□□□□ -2.05
SMARCA1-204ENST00000478420 MAL2Q969L2 176 aa2.23□□□□□ -2.05
SMARCA1-204ENST00000478420 PDXPQ96GD0 296 aa2.23□□□□□ -2.05
SMARCA1-204ENST00000478420 TSPAN32Q96QS1 320 aa2.23□□□□□ -2.05
SMARCA1-204ENST00000478420 MS4A8Q9BY19 250 aa2.23□□□□□ -2.05
SMARCA1-204ENST00000478420 LRTM1Q9HBL6 345 aa2.23□□□□□ -2.05
SMARCA1-204ENST00000478420 TMEM38BQ9NVV0 291 aa2.23□□□□□ -2.05
SMARCA1-204ENST00000478420 GSKIPQ9P0R6 139 aa2.23□□□□□ -2.05
SMARCA1-204ENST00000478420 FIS1Q9Y3D6 152 aa2.23□□□□□ -2.05
SMARCA1-204ENST00000478420 HSPB11Q9Y547 144 aa2.23□□□□□ -2.05
SMARCA1-204ENST00000478420 MIA2Q96PC5 1412 aa2.23□□□□□ -2.05
SMARCA1-204ENST00000478420 IGSF9BQ9UPX0 1349 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 A0A1W2PRE2 83 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 MAP1LC3B2A6NCE7 125 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 EFCAB10A6NFE3 127 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 M0QZK8 103 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 BPY2O14599 106 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 HMGB3O15347 200 aaKnown RBP2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 POP7O75817 140 aaKnown RBP2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 APOMO95445 188 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 IGLV3-27P01718 113 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 HLA-DRB1P01911 266 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 APCSP02743 223 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 OPN1SWP03999 348 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 ZNF286BP0CG31 522 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 C1GALT1C1LP0DN25 315 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 CPMP14384 443 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 GABRA3P34903 492 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 GTF2A1P52655 376 aaPredicted RBP2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 DEFA6Q01524 100 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 LOXL1Q08397 574 aaPredicted RBP2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 DEFB115Q30KQ5 88 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 C12orf74Q32Q52 190 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 CCDC58Q4VC31 144 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 LAIR2Q6ISS4 152 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 DCUN1D2Q6PH85 259 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 C5orf46Q6UWT4 87 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 NTM-AS1Q6ZSK4 140 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 C1orf174Q8IYL3 243 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 TMEM256Q8N2U0 113 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 ZNF664Q8N3J9 261 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 GDPD1Q8N9F7 314 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 GNPDA2Q8TDQ7 276 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 CT55Q8WUE5 264 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 DEDD2Q8WXF8 326 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 TCEAL4Q96EI5 215 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 ABHD14BQ96IU4 210 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 DNAJC30Q96LL9 226 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 CNBD2Q96M20 576 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 C1orf50Q9BV19 199 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 MAP1LC3BQ9GZQ8 125 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 ALX4Q9H161 411 aaPredicted RBP2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 SH3BGRL3Q9H299 93 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 CXorf21Q9HAI6 301 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 PRTFDC1Q9NRG1 225 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 DHCR7Q9UBM7 475 aaKnown RBP2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 SLC23A2Q9UGH3 650 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 ZNF230Q9UIE0 474 aaPredicted RBP2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 ZNF835Q9Y2P0 537 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 YTHDC2Q9H6S0 1430 aaKnown RBP2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 NUP214P35658 2090 aaPredicted RBP2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 RFX7Q2KHR2 1363 aa2.22□□□□□ -2.05
SMARCA1-204ENST00000478420 DENND4BO75064 1496 aaPredicted RBP2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 CABIN1Q9Y6J0 2220 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 IGKV1-12A0A0C4DH73 117 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 G3V2T6 193 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 H3BSA7 217 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 OR7C2O60412 319 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 ZNF682O95780 498 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 IGKV1D-12P01611 117 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 MAS1P04201 325 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 HLA-DQB2P05538 268 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 ZNF688P0C7X2 276 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 MUC1P15941 1255 aaPredicted RBP2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 SPI1P17947 270 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 CDK2P24941 298 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 NPY1RP25929 384 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 OR10J1P30954 320 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 PHBP35232 272 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 TGFBR1P36897 503 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 DEFA3P59666 94 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 TPI1P60174 286 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 ESRRGP62508 458 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 ATP5G2Q06055 141 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 PDGFRLQ15198 375 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 LY6EQ16553 131 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 LUZP6Q538Z0 58 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 FAM78AQ5JUQ0 283 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 AKR1C8PQ5T2L2 129 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 SAMD13Q5VXD3 122 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 LRP11Q86VZ4 500 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 RNF182Q8N6D2 247 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 CIRBP-AS1Q8TBR5 109 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 ZNF721Q8TF20 911 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 C12orf43Q96C57 262 aaKnown RBP2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 PYURFQ96I23 114 aa2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 ERMAPQ96PL5 475 aaPredicted RBP2.21□□□□□ -2.06
SMARCA1-204ENST00000478420 GPER1Q99527 375 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms