RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 DIDO1Q9BTC0 2240 aaKnown RBP4.13□□□□□ -1.75
SF3B6-202ENST00000478050 A0A087WWC5 75 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 TRAV17A0A0B4J275 112 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 LOC102723971A0A1B0GUV8 181 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 A0A1W2PR80 420 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 A1L4Q6 167 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 OOEPA6NGQ2 149 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 CDRT15L2A8MXV6 281 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 SCAF4O95104 1147 aaKnown RBP4.13□□□□□ -1.75
SF3B6-202ENST00000478050 IGKV1-39P01597 117 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 IGKV1-5P01602 117 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 IGLV2-14P01704 120 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 IGKV1D-39P04432 117 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 SRP19P09132 144 aaKnown RBP4.13□□□□□ -1.75
SF3B6-202ENST00000478050 OR13C7P0DN81 318 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 KITLGP21583 273 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 CEACAM6P40199 344 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 RPL35P42766 123 aaKnown RBP4.13□□□□□ -1.75
SF3B6-202ENST00000478050 AKR1D1P51857 326 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 TMEM267Q0VDI3 215 aaPredicted RBP4.13□□□□□ -1.75
SF3B6-202ENST00000478050 PSG7Q13046 419 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 CATR1Q13166 79 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 HABP2Q14520 560 aaPredicted RBP4.13□□□□□ -1.75
SF3B6-202ENST00000478050 GUSBP1Q15486 140 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 IGFBP7Q16270 282 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF585BQ52M93 769 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 SP5Q6BEB4 398 aaPredicted RBP4.13□□□□□ -1.75
SF3B6-202ENST00000478050 TRAT1Q6PIZ9 186 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 IGFL2Q6UWQ7 119 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 MYPOPQ86VE0 399 aaPredicted RBP4.13□□□□□ -1.75
SF3B6-202ENST00000478050 FAM90A1Q86YD7 464 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 IQCF2Q8IXL9 164 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 DRAM1Q8N682 238 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 TMEM217Q8N7C4 229 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF645Q8N7E2 425 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 OR10G4Q8NGN3 311 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 CD300LFQ8TDQ1 290 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 SFT2D1Q8WV19 159 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 PINX1Q96BK5 328 aaKnown RBP4.13□□□□□ -1.75
SF3B6-202ENST00000478050 SARAFQ96BY9 339 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 GALMQ96C23 342 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 MALSU1Q96EH3 234 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 TRIB1Q96RU8 372 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 ABHD14AQ9BUJ0 271 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 BCL2L14Q9BZR8 327 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 OBP2BQ9NPH6 170 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 PSENENQ9NZ42 101 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 PPP1R3CQ9UQK1 317 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 TIMM9Q9Y5J7 89 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 MMP24Q9Y5R2 645 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 DSCAML1Q8TD84 2053 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 CCDC168Q8NDH2 2452 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 NF1P21359 2839 aa4.13□□□□□ -1.75
SF3B6-202ENST00000478050 CSPG4Q6UVK1 2322 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 ATRQ13535 2644 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 USF3Q68DE3 2245 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 A0A1B0GV50 99 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 A0A1W2PPH5 198 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF98A6NK75 572 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 A6NLC8 198 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 B4DEV8 164 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 H3BP45 60 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 IFNL4K9M1U5 179 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 CDIPTO14735 213 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 MLNRO43193 412 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 KLK10O43240 276 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 PPIHO43447 177 aaKnown RBP4.12□□□□□ -1.75
SF3B6-202ENST00000478050 TIMM8AO60220 97 aaPredicted RBP4.12□□□□□ -1.75
SF3B6-202ENST00000478050 WDR1O75083 606 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 NDUFS6O75380 124 aaKnown RBP4.12□□□□□ -1.75
SF3B6-202ENST00000478050 LYZL6O75951 148 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 NXPH3O95157 252 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 OR2C1O95371 312 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 IFNA1P01562 189 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 IFNA17P01571 189 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 IGKV3-15P01624 115 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 S100A8P05109 93 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 S100A6P06703 90 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 GRPP07492 148 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 ADH4P08319 380 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 IAPPP10997 89 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 RAB5AP20339 215 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 AGAP20933 346 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 IL2RGP31785 369 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 MPV17P39210 176 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 AKR1C3P42330 323 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 OR3A1P47881 315 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 ERVS71-1P61550 626 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 CCL20P78556 96 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 S100A12P80511 92 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 SERF2P84101 59 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 RUNX1Q01196 453 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 PMP22Q01453 160 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 HAGHQ16775 308 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 ATP6V1FQ16864 119 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 LRRC75BQ2VPJ9 315 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 SMIM21Q3B7S5 101 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 ALKBH6Q3KRA9 238 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF718Q3SXZ3 478 aa4.12□□□□□ -1.75
SF3B6-202ENST00000478050 KRBOX4Q5JUW0 171 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms