RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CX3CL1P78423 397 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 PITPNAQ00169 270 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 KLF5Q13887 457 aaPredicted RBP3.44□□□□□ -1.86
CKS1B-207ENST00000477676 RSU1Q15404 277 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 Q3ZCU0 254 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 MORN2Q502X0 79 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 CD200R1LQ6Q8B3 271 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 FAM131AQ6UXB0 335 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 ZNF833PQ6ZTB9 187 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 FAM220AQ7Z4H9 259 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 SERPINA12Q8IW75 414 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 SETD9Q8NE22 299 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 OR5D14Q8NGL3 314 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 OR13C5Q8NGS8 318 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 OR52N1Q8NH53 320 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 C2CD4CQ8TF44 421 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 LGALS12Q96DT0 336 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 MS4A10Q96PG2 267 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 RIBC2Q9H4K1 309 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 AAMDCQ9H7C9 122 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 FAM118AQ9NWS6 357 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 IL36GQ9NZH8 169 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 CNOT2Q9NZN8 540 aaKnown RBP3.44□□□□□ -1.86
CKS1B-207ENST00000477676 FOXA2Q9Y261 457 aaPredicted RBP3.44□□□□□ -1.86
CKS1B-207ENST00000477676 A3GALT2U3KPV4 340 aa3.44□□□□□ -1.86
CKS1B-207ENST00000477676 TRAV8-7A0A075B6U6 113 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 SAA2-SAA4A0A096LPE2 208 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 DAPL1A0PJW8 107 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 AIPO00170 330 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 TXNL1O43396 289 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 SC5DO75845 299 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 RGS11O94810 467 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 FAM107AO95990 144 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 LALBAP00709 142 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 OCM2P0CE71 109 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 OCMP0CE72 109 aaPredicted RBP3.43□□□□□ -1.86
CKS1B-207ENST00000477676 LIMS3P0CW19 117 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 LIMS4P0CW20 117 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 SAA2P0DJI9 122 aaPredicted RBP3.43□□□□□ -1.86
CKS1B-207ENST00000477676 CT45A6P0DMU7 189 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 CT45A5P0DMU8 189 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 CT45A7P0DMV0 189 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 IGFBP3P17936 291 aaPredicted RBP3.43□□□□□ -1.86
CKS1B-207ENST00000477676 RAB3AP20336 220 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 IL3RAP26951 378 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 MFAP4P55083 255 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 SYNJ2BPP57105 145 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 RPS11P62280 158 aaKnown RBP eCLIP3.43□□□□□ -1.86
CKS1B-207ENST00000477676 SNRPGP62308 76 aaKnown RBP3.43□□□□□ -1.86
CKS1B-207ENST00000477676 RAB40BQ12829 278 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 MRGPRG-AS1Q2M3A8 158 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 MPV17LQ2QL34 196 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 SLC22A6Q4U2R8 563 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 RPL39P5Q59GN2 51 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 SLC25A30Q5SVS4 291 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 C6orf141Q5SZD1 244 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 ATAD3CQ5T2N8 411 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 ZNF660Q6AZW8 331 aaPredicted RBP3.43□□□□□ -1.86
CKS1B-207ENST00000477676 GLDNQ6ZMI3 551 aaPredicted RBP3.43□□□□□ -1.86
CKS1B-207ENST00000477676 PPP1R27Q86WC6 154 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 SGPP2Q8IWX5 399 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 RPP25LQ8N5L8 163 aaKnown RBP3.43□□□□□ -1.86
CKS1B-207ENST00000477676 ACBD7Q8N6N7 88 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 LFNGQ8NES3 379 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 OR5AK2Q8NH90 309 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 MRPL30Q8TCC3 161 aaKnown RBP3.43□□□□□ -1.86
CKS1B-207ENST00000477676 TMEM170AQ8WVE7 144 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 HARBI1Q96MB7 349 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 TMEM68Q96MH6 324 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 RDH12Q96NR8 316 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 OR4C12Q96R67 309 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 GPER1Q99527 375 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 TMED9Q9BVK6 235 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 PRRG3Q9BZD7 231 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 FAM192AQ9GZU8 254 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 IFI27L2Q9H2X8 130 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 PLEKHA3Q9HB20 300 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 TAF9BQ9HBM6 251 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 AMBNQ9NP70 447 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 GNG12Q9UBI6 72 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 HSPB7Q9UBY9 170 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 STUB1Q9UNE7 303 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 ING4Q9UNL4 249 aa3.43□□□□□ -1.86
CKS1B-207ENST00000477676 MRPS28Q9Y2Q9 187 aaKnown RBP3.43□□□□□ -1.86
CKS1B-207ENST00000477676 LINC00854A0A1B0GVQ3 168 aa3.42□□□□□ -1.86
CKS1B-207ENST00000477676 TMEM212A6NML5 194 aa3.42□□□□□ -1.86
CKS1B-207ENST00000477676 H0YJW9 148 aa3.42□□□□□ -1.86
CKS1B-207ENST00000477676 UBE2CO00762 179 aa3.42□□□□□ -1.86
CKS1B-207ENST00000477676 SPINT2O43291 252 aa3.42□□□□□ -1.86
CKS1B-207ENST00000477676 FADS2O95864 444 aaKnown RBP3.42□□□□□ -1.86
CKS1B-207ENST00000477676 TRGV3P03979 118 aa3.42□□□□□ -1.86
CKS1B-207ENST00000477676 CD7P09564 240 aa3.42□□□□□ -1.86
CKS1B-207ENST00000477676 ZNF182P17025 639 aaPredicted RBP3.42□□□□□ -1.86
CKS1B-207ENST00000477676 MAPK3P27361 379 aaPredicted RBP3.42□□□□□ -1.86
CKS1B-207ENST00000477676 ZNF93P35789 620 aaPredicted RBP3.42□□□□□ -1.86
CKS1B-207ENST00000477676 RASSF2P50749 326 aa3.42□□□□□ -1.86
CKS1B-207ENST00000477676 TPPP2P59282 170 aa3.42□□□□□ -1.86
CKS1B-207ENST00000477676 PJVKQ0ZLH3 352 aa3.42□□□□□ -1.86
CKS1B-207ENST00000477676 PSG5Q15238 335 aa3.42□□□□□ -1.86
CKS1B-207ENST00000477676 C2orf76Q3KRA6 126 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms