RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 EBI3Q14213 229 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 THNSL2Q86YJ6 484 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 TCTEX1D1Q8N7M0 179 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 OR2T10Q8NGZ9 312 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 OR4S2Q8NH73 311 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 OR5R1Q8NH85 324 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 SSMEM1Q8WWF3 244 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 TP53RKQ96S44 253 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 BEX1Q9HBH7 125 aa12.98□□□□□ -0.33
VHL-203ENST00000477538 RBFOX2O43251 390 aaKnown RBP eCLIP12.97□□□□□ -0.33
VHL-203ENST00000477538 HOXA3O43365 443 aaPredicted RBP12.97□□□□□ -0.33
VHL-203ENST00000477538 RAMP3O60896 148 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 PEX14O75381 377 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 IGKV1-16P04430 117 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 OR5AC1P0C628 307 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 OR4E1P0C645 316 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 VSIG10L2P0DP72 767 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 TMEM11P17152 192 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 VAMP1P23763 118 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 SUPT4H1P63272 117 aaKnown RBP12.97□□□□□ -0.33
VHL-203ENST00000477538 DHODHQ02127 395 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 PPP1R1AQ13522 171 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 LY6EQ16553 131 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 FBLN7Q53RD9 439 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 DHRS7BQ6IAN0 325 aaPredicted RBP12.97□□□□□ -0.33
VHL-203ENST00000477538 C11orf88Q6PI97 169 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 CCBE1Q6UXH8 406 aaPredicted RBP12.97□□□□□ -0.33
VHL-203ENST00000477538 OR4C13Q8NGP0 309 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 CD300LFQ8TDQ1 290 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 ZNF418Q8TF45 676 aaPredicted RBP12.97□□□□□ -0.33
VHL-203ENST00000477538 FLYWCH2Q96CP2 140 aaKnown RBP12.97□□□□□ -0.33
VHL-203ENST00000477538 EAF1Q96JC9 268 aaPredicted RBP12.97□□□□□ -0.33
VHL-203ENST00000477538 FAM212BQ9NTI7 297 aaPredicted RBP12.97□□□□□ -0.33
VHL-203ENST00000477538 TCF19Q9Y242 345 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 KCNIP3Q9Y2W7 256 aa12.97□□□□□ -0.33
VHL-203ENST00000477538 INMT-MINDY4F8WBC2 141 aa12.96□□□□□ -0.33
VHL-203ENST00000477538 B3GALNT1O75752 331 aa12.96□□□□□ -0.33
VHL-203ENST00000477538 MECP2P51608 486 aaKnown RBP12.96□□□□□ -0.33
VHL-203ENST00000477538 RPS16P62249 146 aaKnown RBP12.96□□□□□ -0.33
VHL-203ENST00000477538 HNF4GQ14541 408 aa12.96□□□□□ -0.33
VHL-203ENST00000477538 SLC9A3R2Q15599 337 aa12.96□□□□□ -0.33
VHL-203ENST00000477538 TRIM16LQ309B1 348 aa12.96□□□□□ -0.33
VHL-203ENST00000477538 SP6Q3SY56 376 aa12.96□□□□□ -0.33
VHL-203ENST00000477538 ZNF585BQ52M93 769 aa12.96□□□□□ -0.33
VHL-203ENST00000477538 TMEM177Q53S58 311 aa12.96□□□□□ -0.33
VHL-203ENST00000477538 GALNT14Q96FL9 552 aa12.96□□□□□ -0.33
VHL-203ENST00000477538 MARVELD1Q9BSK0 173 aa12.96□□□□□ -0.33
VHL-203ENST00000477538 ALX4Q9H161 411 aaPredicted RBP12.96□□□□□ -0.33
VHL-203ENST00000477538 TNFRSF19Q9NS68 423 aa12.96□□□□□ -0.33
VHL-203ENST00000477538 PITPNC1Q9UKF7 332 aa12.96□□□□□ -0.33
VHL-203ENST00000477538 A6NDX4 124 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 SHOXO15266 292 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 SFT2D2O95562 160 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 HPRT1P00492 218 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 IFNA2P01563 188 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 HLA-AP01891 365 aaKnown RBP12.95□□□□□ -0.34
VHL-203ENST00000477538 SERPINE2P07093 398 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 ANXA3P12429 323 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 UCP1P25874 307 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 LPAR6P43657 344 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 RAG2P55895 527 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 C4orf46Q504U0 113 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 TMEM219Q86XT9 240 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 TMEM86BQ8N661 226 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 Q8N6K4 173 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 OSR1Q8TAX0 266 aaPredicted RBP12.95□□□□□ -0.34
VHL-203ENST00000477538 HARBI1Q96MB7 349 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 RNF5Q99942 180 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 TMEM222Q9H0R3 208 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 VPREB3Q9UKI3 123 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 POMT1Q9Y6A1 747 aa12.95□□□□□ -0.34
VHL-203ENST00000477538 C9orf170A2RU37 121 aa12.94□□□□□ -0.34
VHL-203ENST00000477538 DNAJC9-AS1A6NH13 148 aa12.94□□□□□ -0.34
VHL-203ENST00000477538 S1PR2O95136 353 aa12.94□□□□□ -0.34
VHL-203ENST00000477538 DHRS2Q13268 280 aa12.94□□□□□ -0.34
VHL-203ENST00000477538 TMEM187Q14656 261 aa12.94□□□□□ -0.34
VHL-203ENST00000477538 OXA1LQ15070 435 aa12.94□□□□□ -0.34
VHL-203ENST00000477538 LYG2Q86SG7 212 aa12.94□□□□□ -0.34
VHL-203ENST00000477538 CASTOR1Q8WTX7 329 aa12.94□□□□□ -0.34
VHL-203ENST00000477538 GLYATL2Q8WU03 294 aa12.94□□□□□ -0.34
VHL-203ENST00000477538 RITA1Q96K30 269 aa12.94□□□□□ -0.34
VHL-203ENST00000477538 TSNAXQ99598 290 aaKnown RBP12.94□□□□□ -0.34
VHL-203ENST00000477538 SLC25A33Q9BSK2 321 aa12.94□□□□□ -0.34
VHL-203ENST00000477538 PLEKHA2Q9HB19 425 aa12.94□□□□□ -0.34
VHL-203ENST00000477538 PRR13Q9NZ81 148 aa12.94□□□□□ -0.34
VHL-203ENST00000477538 COMMD9Q9P000 198 aa12.94□□□□□ -0.34
VHL-203ENST00000477538 ZFHX3Q15911 3703 aa12.93□□□□□ -0.34
VHL-203ENST00000477538 OR2F2O95006 317 aa12.93□□□□□ -0.34
VHL-203ENST00000477538 DHFRP00374 187 aa12.93□□□□□ -0.34
VHL-203ENST00000477538 RPA2P15927 270 aa12.93□□□□□ -0.34
VHL-203ENST00000477538 CNTFRP26992 372 aa12.93□□□□□ -0.34
VHL-203ENST00000477538 LGALS7P47929 136 aa12.93□□□□□ -0.34
VHL-203ENST00000477538 HILS1P60008 231 aa12.93□□□□□ -0.34
VHL-203ENST00000477538 MMDQ15546 238 aa12.93□□□□□ -0.34
VHL-203ENST00000477538 MINDY2Q8NBR6 621 aa12.93□□□□□ -0.34
VHL-203ENST00000477538 OR52B4Q8NGK2 314 aa12.93□□□□□ -0.34
VHL-203ENST00000477538 CHPT1Q8WUD6 406 aa12.93□□□□□ -0.34
VHL-203ENST00000477538 RBM14Q96PK6 669 aaKnown RBP12.93□□□□□ -0.34
VHL-203ENST00000477538 DUX5Q96PT3 197 aa12.93□□□□□ -0.34
VHL-203ENST00000477538 JMJD8Q96S16 334 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms