RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 A0A087WUU8 490 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 EVPLLA8MZ36 301 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 GNRH2O43555 120 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 APOMO95445 188 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 ZNF728P0DKX0 622 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 CCL1P22362 96 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 XCL1P47992 114 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 RBM11P57052 281 aaKnown RBP2.43□□□□□ -2.02
VPS50-212ENST00000476413 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 HOXC5Q00444 222 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 UAP1Q16222 522 aaPredicted RBP2.43□□□□□ -2.02
VPS50-212ENST00000476413 COQ5Q5HYK3 327 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 C1orf195Q5TG92 126 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 CD200R1LQ6Q8B3 271 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 GPR32P1Q8NGA4 272 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 JOSD2Q8TAC2 188 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.43□□□□□ -2.02
VPS50-212ENST00000476413 PTH2Q96A98 100 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 TESCQ96BS2 214 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 POLR3HQ9Y535 204 aaPredicted RBP2.43□□□□□ -2.02
VPS50-212ENST00000476413 MPDZO75970 2070 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 WDR90Q96KV7 1748 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 STRCP1A6NGW2 1772 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 ABCC12Q96J65 1359 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 A0A1W2PQL4 384 aaPredicted RBP2.42□□□□□ -2.02
VPS50-212ENST00000476413 TMEM235A6NFC5 223 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 C9JCJ5 164 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 UBE2L6O14933 153 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 PSMD8P48556 350 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 TAS2R30P59541 319 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 RSU1Q15404 277 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 OGFRL1Q5TC84 451 aaPredicted RBP2.42□□□□□ -2.02
VPS50-212ENST00000476413 FAM78BQ5VT40 261 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 RASSF6Q6ZTQ3 369 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 SMCR5Q8TEV8 140 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 FGF13Q92913 245 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 SLC35G5Q96KT7 338 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 CCL13Q99616 98 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 Q9BRP9 147 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 TTTY12Q9BZ98 90 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 HRASLSQ9HDD0 168 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 C3orf18Q9UK00 162 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 COQ4Q9Y3A0 265 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 SIPA1L1O43166 1804 aa2.42□□□□□ -2.02
VPS50-212ENST00000476413 CACNA1GO43497 2377 aa2.41□□□□□ -2.02
VPS50-212ENST00000476413 LY6LH3BQJ8 138 aa2.41□□□□□ -2.02
VPS50-212ENST00000476413 TGOLN2O43493 480 aa2.41□□□□□ -2.02
VPS50-212ENST00000476413 P0DMU3 169 aa2.41□□□□□ -2.02
VPS50-212ENST00000476413 FAM231AP0DMU4 169 aa2.41□□□□□ -2.02
VPS50-212ENST00000476413 FAM231CP0DMU5 169 aa2.41□□□□□ -2.02
VPS50-212ENST00000476413 TBPL1P62380 186 aa2.41□□□□□ -2.02
VPS50-212ENST00000476413 UBE2IP63279 158 aaKnown RBP2.41□□□□□ -2.02
VPS50-212ENST00000476413 CLVS2Q5SYC1 327 aa2.41□□□□□ -2.02
VPS50-212ENST00000476413 OR10K2Q6IF99 312 aa2.41□□□□□ -2.02
VPS50-212ENST00000476413 C10orf67Q8IYJ2 551 aa2.41□□□□□ -2.02
VPS50-212ENST00000476413 OR2T27Q8NH04 317 aa2.41□□□□□ -2.02
VPS50-212ENST00000476413 GNPNAT1Q96EK6 184 aaPredicted RBP2.41□□□□□ -2.02
VPS50-212ENST00000476413 XPNPEP1Q9NQW7 623 aa2.41□□□□□ -2.02
VPS50-212ENST00000476413 ANAPC10Q9UM13 185 aa2.41□□□□□ -2.02
VPS50-212ENST00000476413 ICE1Q9Y2F5 2266 aa2.41□□□□□ -2.02
VPS50-212ENST00000476413 ADCY9O60503 1353 aa2.4□□□□□ -2.02
VPS50-212ENST00000476413 DHX57Q6P158 1386 aaKnown RBP2.4□□□□□ -2.02
VPS50-212ENST00000476413 FNDC10F2Z333 226 aa2.4□□□□□ -2.03
VPS50-212ENST00000476413 CD24P25063 80 aa2.4□□□□□ -2.03
VPS50-212ENST00000476413 GABRA2P47869 451 aa2.4□□□□□ -2.03
VPS50-212ENST00000476413 KRTAP12-1P59990 96 aa2.4□□□□□ -2.03
VPS50-212ENST00000476413 MAGOHP61326 146 aaKnown RBP2.4□□□□□ -2.03
VPS50-212ENST00000476413 FKBP1AP62942 108 aaKnown RBP2.4□□□□□ -2.03
VPS50-212ENST00000476413 SFXN4Q6P4A7 337 aa2.4□□□□□ -2.03
VPS50-212ENST00000476413 GLT6D1Q7Z4J2 308 aa2.4□□□□□ -2.03
VPS50-212ENST00000476413 UMODL1-AS1Q8N2C9 162 aa2.4□□□□□ -2.03
VPS50-212ENST00000476413 RAB2BQ8WUD1 216 aa2.4□□□□□ -2.03
VPS50-212ENST00000476413 NMNAT3Q96T66 252 aa2.4□□□□□ -2.03
VPS50-212ENST00000476413 MIEN1Q9BRT3 115 aa2.4□□□□□ -2.03
VPS50-212ENST00000476413 C9orf84Q5VXU9 1444 aa2.4□□□□□ -2.03
VPS50-212ENST00000476413 FBN1P35555 2871 aaKnown RBP2.39□□□□□ -2.03
VPS50-212ENST00000476413 A0A0G2JQZ4 141 aa2.39□□□□□ -2.03
VPS50-212ENST00000476413 A0A1W2PQD3 144 aa2.39□□□□□ -2.03
VPS50-212ENST00000476413 COX7A2LO14548 114 aa2.39□□□□□ -2.03
VPS50-212ENST00000476413 ISG15P05161 165 aa2.39□□□□□ -2.03
VPS50-212ENST00000476413 KRT7P08729 469 aa2.39□□□□□ -2.03
VPS50-212ENST00000476413 ZNF140P52738 457 aaPredicted RBP2.39□□□□□ -2.03
VPS50-212ENST00000476413 PTRHD1Q6GMV3 140 aaKnown RBP2.39□□□□□ -2.03
VPS50-212ENST00000476413 ZNF550Q7Z398 422 aa2.39□□□□□ -2.03
VPS50-212ENST00000476413 SLC51BQ86UW2 128 aa2.39□□□□□ -2.03
VPS50-212ENST00000476413 SLC35F6Q8N357 371 aa2.39□□□□□ -2.03
VPS50-212ENST00000476413 SGMS2Q8NHU3 365 aa2.39□□□□□ -2.03
VPS50-212ENST00000476413 SPZ1Q9BXG8 430 aa2.39□□□□□ -2.03
VPS50-212ENST00000476413 TTTY13Q9BZ97 58 aa2.39□□□□□ -2.03
VPS50-212ENST00000476413 TMEM222Q9H0R3 208 aa2.39□□□□□ -2.03
VPS50-212ENST00000476413 PRO2289Q9P1D8 64 aa2.39□□□□□ -2.03
VPS50-212ENST00000476413 ACOX3O15254 700 aa2.38□□□□□ -2.03
VPS50-212ENST00000476413 ALOX5APP20292 161 aa2.38□□□□□ -2.03
VPS50-212ENST00000476413 RPL27AP46776 148 aaKnown RBP2.38□□□□□ -2.03
VPS50-212ENST00000476413 NAA20P61599 178 aa2.38□□□□□ -2.03
VPS50-212ENST00000476413 DEFB103AP81534 67 aa2.38□□□□□ -2.03
VPS50-212ENST00000476413 TNFAIP6P98066 277 aaPredicted RBP2.38□□□□□ -2.03
VPS50-212ENST00000476413 TPRXLQ17RH7 258 aa2.38□□□□□ -2.03
VPS50-212ENST00000476413 PCOTHQ58A44 107 aa2.38□□□□□ -2.03
VPS50-212ENST00000476413 AGTRAPQ6RW13 159 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms