RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 METTL26Q96S19 204 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 PCBD2Q9H0N5 130 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 PARVBQ9HBI1 364 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 FBXO5Q9UKT4 447 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 FLVCR2Q9UPI3 526 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 KLF13Q9Y2Y9 288 aaPredicted RBP2.26□□□□□ -2.05
PTCD3-211ENST00000476215 ZNF106Q9H2Y7 1883 aaKnown RBP2.26□□□□□ -2.05
PTCD3-211ENST00000476215 SNRNP200O75643 2136 aaKnown RBP2.26□□□□□ -2.05
PTCD3-211ENST00000476215 ZGRF1Q86YA3 2104 aa2.26□□□□□ -2.05
PTCD3-211ENST00000476215 ITPR3Q14573 2671 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 PKDREJQ9NTG1 2253 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 IGHV1-45A0A0A0MS14 117 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 SEC14L6B5MCN3 397 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 E5RI56 91 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 RGS5O15539 181 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 NSA2O95478 260 aaKnown RBP2.25□□□□□ -2.05
PTCD3-211ENST00000476215 STATHP02808 62 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 C8GP07360 202 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 IMPA1P29218 277 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 SLC9A3R2Q15599 337 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 NDUFAF6Q330K2 333 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 HCP5Q6MZN7 132 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 AGTRAPQ6RW13 159 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 ASCL4Q6XD76 172 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 CYP4Z2PQ8N1L4 340 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 LINC00337Q8N6G1 96 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 CD200R1Q8TD46 325 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 FXYD5Q96DB9 178 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 THTPAQ9BU02 230 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 CHID1Q9BWS9 393 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 DRC3Q9H069 523 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 DSN1Q9H410 356 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 C14orf105Q9NVL8 296 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 TAS2R13Q9NYV9 303 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 TAC3Q9UHF0 121 aa2.25□□□□□ -2.05
PTCD3-211ENST00000476215 ZNF469Q96JG9 3925 aaPredicted RBP2.24□□□□□ -2.05
PTCD3-211ENST00000476215 HEATR5BQ9P2D3 2071 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 IGLL5B9A064 214 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 C15orf65H3BRN8 121 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 M0R1B8 84 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 PGRMC1O00264 195 aaKnown RBP2.24□□□□□ -2.05
PTCD3-211ENST00000476215 UPK1AO00322 258 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 BANF1O75531 89 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 SERPINA6P08185 405 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 BTG2P78543 158 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 TOMM34Q15785 309 aaPredicted RBP2.24□□□□□ -2.05
PTCD3-211ENST00000476215 PDZD11Q5EBL8 140 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 SPANXN3Q5MJ09 141 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 SLC25A25Q6KCM7 469 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 XKRXQ6PP77 449 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 RPS19BP1Q86WX3 136 aaKnown RBP2.24□□□□□ -2.05
PTCD3-211ENST00000476215 CPNE9Q8IYJ1 553 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 SLC35F6Q8N357 371 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 TBC1D19Q8N5T2 526 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 ZNF555Q8NEP9 628 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 OR4A15Q8NGL6 344 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 CMTM2Q8TAZ6 248 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 ANKRD7Q92527 254 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 TNFRSF14Q92956 283 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 UTP23Q9BRU9 249 aaKnown RBP2.24□□□□□ -2.05
PTCD3-211ENST00000476215 SRRQ9GZT4 340 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 ABCG5Q9H222 651 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 SLC38A1Q9H2H9 487 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 ANKHQ9HCJ1 492 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 PARP11Q9NR21 331 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 SNX12Q9UMY4 172 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 INSIG2Q9Y5U4 225 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 SCN3AQ9NY46 2000 aa2.24□□□□□ -2.05
PTCD3-211ENST00000476215 TRAV8-7A0A075B6U6 113 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 ANKRD20A5PA0PJZ0 165 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 ZNF860A6NHJ4 632 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 TCAPO15273 167 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 GATCO43716 136 aaKnown RBP2.23□□□□□ -2.05
PTCD3-211ENST00000476215 ENTPD6O75354 484 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 UQCRHP07919 91 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 PRPS1L1P21108 318 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 ARR3P36575 388 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 CA7P43166 264 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 SLC18A1P54219 525 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 OR4D2P58180 307 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 RAB8AP61006 207 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 TBPL1P62380 186 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 SKP1P63208 163 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 BTN3A2P78410 334 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 DR1Q01658 176 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 ZNF141Q15928 474 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 C18orf21Q32NC0 220 aaPredicted RBP2.23□□□□□ -2.05
PTCD3-211ENST00000476215 CDKL4Q5MAI5 379 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 IDNKQ5T6J7 187 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 SYT6Q5T7P8 510 aaPredicted RBP2.23□□□□□ -2.05
PTCD3-211ENST00000476215 NIPAL1Q6NVV3 410 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 SBSNQ6UWP8 590 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 DOLPP1Q86YN1 238 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 CRLF3Q8IUI8 442 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 CA13Q8N1Q1 262 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 TSLPQ969D9 159 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 LRRC39Q96DD0 335 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 BCL7BQ9BQE9 202 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 AIF1LQ9BQI0 150 aa2.23□□□□□ -2.05
PTCD3-211ENST00000476215 AICDAQ9GZX7 198 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms