RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 RAB22AQ9UL26 194 aa5.36□□□□□ -1.55
HDAC3-207ENST00000475549 CSMD3Q7Z407 3707 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 A0A075B6Q4 140 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 TRAV1-2A0A0B4J238 106 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 TRDV1A0A1B0GX56 115 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 MSGN1A6NI15 193 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 A8MZ25 164 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 CNIH1O95406 144 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 PRH1P02810 166 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 IGHV4-30-4P0DP06 118 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 HIST1H1DP16402 221 aaKnown RBP5.35□□□□□ -1.55
HDAC3-207ENST00000475549 DUTP33316 252 aaKnown RBP5.35□□□□□ -1.55
HDAC3-207ENST00000475549 SERPINB10P48595 397 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 MECP2P51608 486 aaKnown RBP5.35□□□□□ -1.55
HDAC3-207ENST00000475549 BRWD1-AS2P59051 145 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 TRAM1Q15629 374 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 SRSF7Q16629 238 aaKnown RBP eCLIP5.35□□□□□ -1.55
HDAC3-207ENST00000475549 ZNF343Q6P1L6 599 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 ADAMTSL5Q6ZMM2 481 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 IDO2Q6ZQW0 420 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 H1FOOQ8IZA3 346 aaPredicted RBP5.35□□□□□ -1.55
HDAC3-207ENST00000475549 BVESQ8NE79 360 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 OR6Q1Q8NGQ2 317 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 OR10J5Q8NHC4 309 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 MUC7Q8TAX7 377 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 OR4C12Q96R67 309 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 TM2D3Q9BRN9 247 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 ZNF355PQ9NSJ1 428 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 DMRT1Q9Y5R6 373 aa5.35□□□□□ -1.55
HDAC3-207ENST00000475549 DNAH7Q8WXX0 4024 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 C13orf42A0A1B0GVH6 325 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 A0A1B0GW64 132 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 SMIM30A4D0T7 59 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 IZUMO1RA6ND01 250 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 E7EUB6 86 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 H3BUA1 57 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 DIRAS3O95661 229 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 APOA2P02652 100 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 CSN3P07498 182 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 RAB6AP20340 208 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 CD40LGP29965 261 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 PSMD7P51665 324 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 SYNJ2BPP57105 145 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 PITPNAQ00169 270 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 ZNF45Q02386 682 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 TBCEQ15813 527 aaPredicted RBP5.34□□□□□ -1.55
HDAC3-207ENST00000475549 PRSS8Q16651 343 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 C22orf42Q6IC83 251 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 IZUMO2Q6UXV1 221 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 Q6ZS49 121 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 ADAD2Q8NCV1 583 aaKnown RBP5.34□□□□□ -1.55
HDAC3-207ENST00000475549 OR9G4Q8NGQ1 327 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 HARBI1Q96MB7 349 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 TMEM68Q96MH6 324 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 CITED4Q96RK1 184 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 TINAGL1Q9GZM7 467 aaPredicted RBP5.34□□□□□ -1.55
HDAC3-207ENST00000475549 EDA2RQ9HAV5 297 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 NDUFB11Q9NX14 153 aa5.34□□□□□ -1.55
HDAC3-207ENST00000475549 EPPK1P58107 5090 aaKnown RBP5.33□□□□□ -1.56
HDAC3-207ENST00000475549 TRBV9A0A0B4J1U6 114 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 IGKV1D-13A0A0B4J2D9 117 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 A0A0G2JLM5 398 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 J3QRK9 145 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 BMPR1BO00238 502 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 SHOXO15266 292 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 SSX5O60225 188 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 CRYZL1O95825 349 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 IGKV1-13P0DP09 117 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 ZP3P21754 424 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 NFYAP23511 347 aaPredicted RBP5.33□□□□□ -1.56
HDAC3-207ENST00000475549 UBE2KP61086 200 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 RPL30P62888 115 aaKnown RBP5.33□□□□□ -1.56
HDAC3-207ENST00000475549 EIF4EBP1Q13541 118 aaPredicted RBP5.33□□□□□ -1.56
HDAC3-207ENST00000475549 CDNFQ49AH0 187 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 C10orf55Q5SWW7 151 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 HACD4Q5VWC8 232 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 LINC00322Q6ZN03 302 aaPredicted RBP5.33□□□□□ -1.56
HDAC3-207ENST00000475549 C19orf35Q6ZS72 473 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 ZNF367Q7RTV3 350 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 ANKRD13BQ86YJ7 626 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 VKORC1L1Q8N0U8 176 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 TEX45Q8NA69 505 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 SRSF12Q8WXF0 261 aaKnown RBP5.33□□□□□ -1.56
HDAC3-207ENST00000475549 USMG5Q96IX5 58 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 CNBD2Q96M20 576 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 RSRP1Q9BUV0 290 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 ST6GALNAC5Q9BVH7 336 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 ELOVL1Q9BW60 279 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 ZNF430Q9H8G1 570 aaPredicted RBP5.33□□□□□ -1.56
HDAC3-207ENST00000475549 AKIP1Q9NQ31 210 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 PEF1Q9UBV8 284 aaKnown RBP5.33□□□□□ -1.56
HDAC3-207ENST00000475549 STUB1Q9UNE7 303 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 STARD9Q9P2P6 4700 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 SACSQ9NZJ4 4579 aa5.33□□□□□ -1.56
HDAC3-207ENST00000475549 ZNF785A8K8V0 405 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 PDCD5O14737 125 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 HLA-DQB1P01920 261 aa5.32□□□□□ -1.56
HDAC3-207ENST00000475549 IL6RP08887 468 aaPredicted RBP5.32□□□□□ -1.56
HDAC3-207ENST00000475549 SAA1P0DJI8 122 aaPredicted RBP5.32□□□□□ -1.56
HDAC3-207ENST00000475549 RRASP10301 218 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms