RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 FKBP11Q9NYL4 201 aa11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 PILRBQ9UKJ0 227 aa11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 TRAPPC1Q9Y5R8 145 aa11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 IGHV3-43A0A0B4J1X8 118 aa11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 PIGBOS1A0A0B4J2F0 54 aa11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 C12orf77C9JDV5 145 aa11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 FAM90A26D6RGX4 464 aa11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 IGHV3-43DP0DP04 118 aa11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 ARR3P36575 388 aa11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 ACOT6Q3I5F7 207 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 ETFRF1Q6IPR1 90 aa11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 MDP1Q86V88 176 aa11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 MCEMP1Q8IX19 187 aa11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 ZNF709Q8N972 641 aa11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 PLPPR2Q96GM1 343 aa11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 PATZ1Q9HBE1 687 aaKnown RBP11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 MBNL3Q9NUK0 354 aaKnown RBP11.33□□□□□ -0.6
ARHGEF39-203ENST00000475323 DEFB108AA8MXU0 73 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 NEURL1O76050 574 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 SYNGR4O95473 234 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 TYMSP04818 313 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 ZNF25P17030 456 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 SRP14P37108 136 aaKnown RBP11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 CDC34P49427 236 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 AESQ08117 197 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 ZNF826PQ6ZT77 177 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 ZNF645Q8N7E2 425 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 Q8N7P7 452 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 SDSLQ96GA7 329 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 OR2J1Q9GZK6 312 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 HCFC1P51610 2035 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 TRBV20OR9-2A0A075B6H5 130 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 MLNRO43193 412 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 IQCJQ1A5X6 159 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 TDRG1Q3Y452 100 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 MOB1BQ7L9L4 216 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 MAFAQ8NHW3 353 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 CT55Q8WUE5 264 aa11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 BOKQ9UMX3 212 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF39-203ENST00000475323 CD82P27701 267 aa11.31□□□□□ -0.6
ARHGEF39-203ENST00000475323 ERVK11-1P61568 191 aa11.31□□□□□ -0.6
ARHGEF39-203ENST00000475323 MSMO1Q15800 293 aa11.31□□□□□ -0.6
ARHGEF39-203ENST00000475323 KCNIP4Q6PIL6 250 aa11.31□□□□□ -0.6
ARHGEF39-203ENST00000475323 SGMS2Q8NHU3 365 aa11.31□□□□□ -0.6
ARHGEF39-203ENST00000475323 RFESDQ8TAC1 157 aa11.31□□□□□ -0.6
ARHGEF39-203ENST00000475323 ASCL3Q9NQ33 180 aa11.31□□□□□ -0.6
ARHGEF39-203ENST00000475323 GOLT1BQ9Y3E0 138 aa11.31□□□□□ -0.6
ARHGEF39-203ENST00000475323 LINC00473A8K010 186 aa11.31□□□□□ -0.6
ARHGEF39-203ENST00000475323 THBS3P49746 956 aa11.31□□□□□ -0.6
ARHGEF39-203ENST00000475323 PPP1CBP62140 327 aa11.31□□□□□ -0.6
ARHGEF39-203ENST00000475323 Q6ZR03 302 aa11.31□□□□□ -0.6
ARHGEF39-203ENST00000475323 IMMP2LQ96T52 175 aa11.31□□□□□ -0.6
ARHGEF39-203ENST00000475323 MRPS18CQ9Y3D5 142 aaKnown RBP11.31□□□□□ -0.6
ARHGEF39-203ENST00000475323 WIPI2Q9Y4P8 454 aa11.31□□□□□ -0.6
ARHGEF39-203ENST00000475323 ZDBF2Q9HCK1 2354 aa11.31□□□□□ -0.6
ARHGEF39-203ENST00000475323 ATP6V1FQ16864 119 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 TMEM144Q7Z5S9 345 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 MRGPRDQ8TDS7 321 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 RTL8AQ9BWD3 113 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 CFAP47Q6ZTR5 3102 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 RNF212BA8MTL3 300 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 VENTXO95231 258 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 HBZP02008 142 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 SERPINA7P05543 415 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 ADMP35318 185 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 RPL29P47914 159 aaKnown RBP11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 LTC4SQ16873 150 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 PMS2CLQ68D20 193 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 LINC00696Q6ZRV3 163 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 H2BFWTQ7Z2G1 175 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 TMEM105Q8N8V8 129 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 GALMQ96C23 342 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 MS4A10Q96PG2 267 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 SIT1Q9Y3P8 196 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 LOXL2Q9Y4K0 774 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 PXMP4Q9Y6I8 212 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 C15orf62A8K5M9 175 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 ZNF705FA8MVS1 300 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 SH2D1BO14796 132 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 FRMD6-AS1P0C7T7 363 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 ZNF705DP0CH99 300 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 ZNF705BP0CI00 300 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 CCKARP32238 428 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 SSTR5P35346 364 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 ERVFC1-1P60608 527 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 EIF4EBP1Q13541 118 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 QTRT1Q9BXR0 403 aaKnown RBP11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 TTTY12Q9BZ98 90 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 GP6Q9HCN6 339 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 NAGKQ9UJ70 344 aa11.3□□□□□ -0.6
ARHGEF39-203ENST00000475323 HAND1O96004 215 aa11.29□□□□□ -0.6
ARHGEF39-203ENST00000475323 TBX15Q96SF7 602 aa11.29□□□□□ -0.6
ARHGEF39-203ENST00000475323 DCTN5Q9BTE1 182 aa11.29□□□□□ -0.6
ARHGEF39-203ENST00000475323 ZNF146Q15072 292 aa11.29□□□□□ -0.6
ARHGEF39-203ENST00000475323 TMEM251Q8N6I4 163 aa11.29□□□□□ -0.6
ARHGEF39-203ENST00000475323 FAM173AQ9BQD7 235 aa11.29□□□□□ -0.6
ARHGEF39-203ENST00000475323 ELOVL5Q9NYP7 299 aa11.29□□□□□ -0.6
ARHGEF39-203ENST00000475323 KCNIP1Q9NZI2 227 aa11.29□□□□□ -0.6
ARHGEF39-203ENST00000475323 METRNQ9UJH8 293 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms