RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 CLRN3Q8NCR9 226 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 LHFPL5Q8TAF8 219 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 RAB24Q969Q5 203 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 RMI2Q96E14 147 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 ALKBH7Q9BT30 221 aaPredicted RBP3.91□□□□□ -1.78
CCNL1-215ENST00000474539 TNFSF18Q9UNG2 199 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 IGHV3-64DA0A0J9YX35 117 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 C1QTNF9BB2RNN3 333 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 RFPL3SP0C7P2 107 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 C1QTNF9P0C862 333 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 VSIG10L2P0DP72 767 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 ASIPP42127 132 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 RPS27P42677 84 aaKnown RBP3.91□□□□□ -1.78
CCNL1-215ENST00000474539 APOC4P55056 127 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 LY6EQ16553 131 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 DEFB113Q30KQ7 82 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 OR51G1Q8NGK1 321 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 CLDND2Q8NHS1 167 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 C17orf50Q8WW18 174 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 MS4A3Q96HJ5 214 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 PUS1Q9Y606 427 aaKnown RBP eCLIP3.91□□□□□ -1.78
CCNL1-215ENST00000474539 SRRM5B3KS81 715 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 NPFFO15130 113 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF250P15622 560 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 NKX2-5P52952 324 aaPredicted RBP3.91□□□□□ -1.78
CCNL1-215ENST00000474539 ERVFC1-1P60608 527 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 ELOBQ15370 118 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 ASPHD2Q6ICH7 369 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 WFIKKN1Q96NZ8 548 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 DOCK5Q9H7D0 1870 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 A0A1B0GTL3 188 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF705GA8MUZ8 300 aaPredicted RBP3.9□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF705FA8MVS1 300 aaPredicted RBP3.9□□□□□ -1.78
CCNL1-215ENST00000474539 A8MWL6 223 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 TMEM178BH3BS89 294 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 CLEC2LP0C7M8 214 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF705DP0CH99 300 aaPredicted RBP3.9□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF705BP0CI00 300 aaPredicted RBP3.9□□□□□ -1.78
CCNL1-215ENST00000474539 UBE2E1P51965 193 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 SNRPNP63162 240 aaKnown RBP3.9□□□□□ -1.78
CCNL1-215ENST00000474539 PSG7Q13046 419 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 FAM159AQ6UWV7 190 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 UBE2DNLQ8IWF7 75 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 DMRTC2Q8IXT2 367 aaPredicted RBP3.9□□□□□ -1.78
CCNL1-215ENST00000474539 VN1R17PQ8TDU5 208 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 SMIM8Q96KF7 97 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF488Q96MN9 340 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 SLX1AQ9BQ83 275 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 MRPL37Q9BZE1 423 aaKnown RBP3.9□□□□□ -1.78
CCNL1-215ENST00000474539 TMEM222Q9H0R3 208 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 SLC25A22Q9H936 323 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 SIRT7Q9NRC8 400 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 CCL28Q9NRJ3 127 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 TMEM140Q9NV12 185 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF230Q9UIE0 474 aaPredicted RBP3.9□□□□□ -1.78
CCNL1-215ENST00000474539 IGKV1D-42A0A075B6H8 117 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 PQLC2LA1A4F0 135 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 PGPA6NDG6 321 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 G3V3Q6 166 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 H3BMH7 237 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 ETV2O00321 342 aaPredicted RBP3.9□□□□□ -1.78
CCNL1-215ENST00000474539 PTBP3O95758 552 aaKnown RBP3.9□□□□□ -1.78
CCNL1-215ENST00000474539 TDGF1P13385 188 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 FOSL1P15407 271 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 PRTN3P24158 256 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 CDKN1AP38936 164 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 GATA4P43694 442 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 SULT1A2P50226 295 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 IRF3Q14653 427 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 TMEM241Q24JQ0 296 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 SPANXN1Q5VSR9 72 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 HEPN1Q6WQI6 88 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF429Q86V71 674 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 TMEM167AQ8TBQ9 72 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 NRG4Q8WWG1 115 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 MRPL13Q9BYD1 178 aaKnown RBP3.9□□□□□ -1.78
CCNL1-215ENST00000474539 FBXL7Q9UJT9 491 aa3.9□□□□□ -1.78
CCNL1-215ENST00000474539 SIP14410 1827 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 TEX50A0A1B0GTY4 177 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 NPIPB7O75200 414 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 SCO1O75880 301 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 IGHV1-46P01743 117 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 MT-ND6P03923 174 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 COL8A1P27658 744 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 OR5C1Q8NGR4 320 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 ADAT3Q96EY9 351 aaPredicted RBP3.9□□□□□ -1.79
CCNL1-215ENST00000474539 NOL4LQ96MY1 436 aaPredicted RBP3.9□□□□□ -1.79
CCNL1-215ENST00000474539 NEURL2Q9BR09 285 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 PRORYQ9H606 182 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 SOX21Q9Y651 276 aaPredicted RBP3.9□□□□□ -1.79
CCNL1-215ENST00000474539 TRAV41A0A0B4J266 112 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 M6PRP20645 277 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 SRIP30626 198 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 HINT1P49773 126 aaPredicted RBP3.9□□□□□ -1.79
CCNL1-215ENST00000474539 FCN2Q15485 313 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 FBXL19-AS1Q494R0 122 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 FOXB2Q5VYV0 432 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 FAM53AQ6NSI3 398 aaPredicted RBP3.9□□□□□ -1.79
CCNL1-215ENST00000474539 FOXL2NBQ6ZUU3 175 aa3.9□□□□□ -1.79
CCNL1-215ENST00000474539 TMEM179BQ7Z7N9 219 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms