RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 LINC00205P59089 165 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 ERVK-16P61578 105 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 SUPT4H1P63272 117 aaKnown RBP6.72□□□□□ -1.33
CNN3-205ENST00000474409 DHODHQ02127 395 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 LRRC75BQ2VPJ9 315 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 SP6Q3SY56 376 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 C9orf139Q6ZV77 190 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 ZNF695Q8IW36 515 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 BCL6BQ8N143 479 aaPredicted RBP6.72□□□□□ -1.33
CNN3-205ENST00000474409 TCTEX1D1Q8N7M0 179 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 OR5AN1Q8NGI8 311 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 CD300LFQ8TDQ1 290 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 ZNF431Q8TF32 576 aaPredicted RBP6.72□□□□□ -1.33
CNN3-205ENST00000474409 DDB2Q92466 427 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 ZDHHC16Q969W1 377 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 GALNT14Q96FL9 552 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 HARBI1Q96MB7 349 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 PHB2Q99623 299 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 PRR13Q9NZ81 148 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 CDC42EP3Q9UKI2 254 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 ALG5Q9Y673 324 aa6.72□□□□□ -1.33
CNN3-205ENST00000474409 A0A0B4J293 547 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 PIGBOS1A0A0B4J2F0 54 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 SHOXO15266 292 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 RBFOX2O43251 390 aaKnown RBP eCLIP6.71□□□□□ -1.34
CNN3-205ENST00000474409 SSNA1O43805 119 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 ATG12O94817 140 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 S1PR2O95136 353 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 VENTXO95231 258 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 DUS4LO95620 317 aaKnown RBP6.71□□□□□ -1.34
CNN3-205ENST00000474409 HPRT1P00492 218 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 IGKV1-16P04430 117 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 RPA2P15927 270 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 TMEM11P17152 192 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 CD24P25063 80 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 UCP1P25874 307 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 CD1BP29016 333 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 LPAR6P43657 344 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 TMEM187Q14656 261 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 DEFB112Q30KQ8 113 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 TMEM268Q5VZI3 342 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 LIN54Q6MZP7 749 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 LIAT1Q6ZQX7 453 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 LGI3Q8N145 548 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 UXS1Q8NBZ7 420 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 OR4C13Q8NGP0 309 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 OR2T10Q8NGZ9 312 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 OSR1Q8TAX0 266 aaPredicted RBP6.71□□□□□ -1.34
CNN3-205ENST00000474409 CFHR4Q92496 578 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 FLYWCH2Q96CP2 140 aaKnown RBP6.71□□□□□ -1.34
CNN3-205ENST00000474409 AJUBAQ96IF1 538 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 SSX3Q99909 188 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 TMEM222Q9H0R3 208 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 ALX4Q9H161 411 aaPredicted RBP6.71□□□□□ -1.34
CNN3-205ENST00000474409 MEGF9Q9H1U4 602 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 GSX1Q9H4S2 264 aaPredicted RBP6.71□□□□□ -1.34
CNN3-205ENST00000474409 FAM212BQ9NTI7 297 aaPredicted RBP6.71□□□□□ -1.34
CNN3-205ENST00000474409 COMMD9Q9P000 198 aa6.71□□□□□ -1.34
CNN3-205ENST00000474409 SOX21Q9Y651 276 aaPredicted RBP6.71□□□□□ -1.34
CNN3-205ENST00000474409 A0A0A6YYJ9 748 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 MARCH11A6NNE9 402 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 SNRPGP15A8MWD9 76 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 INAFM1C9JVW0 142 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 H3BUX3 64 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 MOSP00540 346 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 HRASP01112 189 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 FAM106CPP0CH98 169 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 NQO2P16083 231 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 RPS16P62249 146 aaKnown RBP6.7□□□□□ -1.34
CNN3-205ENST00000474409 HABP2Q14520 560 aaPredicted RBP6.7□□□□□ -1.34
CNN3-205ENST00000474409 HNF4GQ14541 408 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 MMDQ15546 238 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 ANKRD55Q3KP44 614 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 VMA21Q3ZAQ7 101 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 RBMS3Q6XE24 437 aaKnown RBP6.7□□□□□ -1.34
CNN3-205ENST00000474409 C12orf45Q8N5I9 185 aaPredicted RBP6.7□□□□□ -1.34
CNN3-205ENST00000474409 DMBX1Q8NFW5 382 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 LHFPL5Q8TAF8 219 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 GLYATL2Q8WU03 294 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 MITD1Q8WV92 249 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 RBPMSQ93062 196 aaKnown RBP6.7□□□□□ -1.34
CNN3-205ENST00000474409 R3HDM4Q96D70 268 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 PLEKHA2Q9HB19 425 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 KIAA1456Q9P272 454 aa6.7□□□□□ -1.34
CNN3-205ENST00000474409 HIVEP1P15822 2718 aa6.69□□□□□ -1.34
CNN3-205ENST00000474409 hCG_2014768A0A024R1R8 64 aa6.69□□□□□ -1.34
CNN3-205ENST00000474409 A0A0B4J2A0 478 aa6.69□□□□□ -1.34
CNN3-205ENST00000474409 DUXBA0A1W2PPF3 345 aa6.69□□□□□ -1.34
CNN3-205ENST00000474409 C7orf66A4D0T2 115 aa6.69□□□□□ -1.34
CNN3-205ENST00000474409 VGLL3A8MV65 326 aa6.69□□□□□ -1.34
CNN3-205ENST00000474409 GOSR2O14653 212 aa6.69□□□□□ -1.34
CNN3-205ENST00000474409 NBR2O15453 112 aa6.69□□□□□ -1.34
CNN3-205ENST00000474409 SPDEFO95238 335 aa6.69□□□□□ -1.34
CNN3-205ENST00000474409 CDS2O95674 445 aa6.69□□□□□ -1.34
CNN3-205ENST00000474409 KRASP01116 189 aa6.69□□□□□ -1.34
CNN3-205ENST00000474409 IFNA21P01568 189 aa6.69□□□□□ -1.34
CNN3-205ENST00000474409 HOXB5P09067 269 aa6.69□□□□□ -1.34
CNN3-205ENST00000474409 SAA1P0DJI8 122 aaPredicted RBP6.69□□□□□ -1.34
CNN3-205ENST00000474409 G6PCP35575 357 aa6.69□□□□□ -1.34
CNN3-205ENST00000474409 DYNLT3P51808 116 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms