RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 OR1L1Q8NH94 360 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 FAM57AQ8TBR7 257 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 MRGPRDQ8TDS7 321 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 SFT2D1Q8WV19 159 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 S100PBPQ96BU1 408 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 ADTRPQ96IZ2 230 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 MLST8Q9BVC4 326 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 TMEM147Q9BVK8 224 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 NCOR1P1Q9H4R4 102 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 C11orf1Q9H5F2 150 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 TUBA4BQ9H853 241 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 ENY2Q9NPA8 101 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 NGBQ9NPG2 151 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 ELOVL5Q9NYP7 299 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 ZDHHC8Q9ULC8 765 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 FZR1Q9UM11 496 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 RNF115Q9Y4L5 304 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 TIMM9Q9Y5J7 89 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 ZFYVE26Q68DK2 2539 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 CNTRLQ7Z7A1 2325 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 ASPMQ8IZT6 3477 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 TRAV39A0A0B4J263 110 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 A0A1B0GV50 99 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 A0A1B0GWJ7 208 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 SRRM5B3KS81 715 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 B4DEV8 164 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 B5MCH6 92 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 PROB1E7EW31 1015 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 H3BP45 60 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 WNT9BO14905 357 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 RBFOX2O43251 390 aaKnown RBP eCLIP4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 HPRT1P00492 218 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 KRASP01116 189 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 CGAP01215 116 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 MT-ND4LP03901 98 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 OR13C7P0DN81 318 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 ADCYAP1P18509 176 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 WT1P19544 449 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 ZFP36P26651 326 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 APOBEC3AP31941 199 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 PPP1CCP36873 323 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 NPBWR1P48145 328 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 CEBPDP49716 269 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 CASP6P55212 293 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 EDDM3BP56851 147 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 TNFAIP6P98066 277 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNF816Q0VGE8 651 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 FOXF2Q12947 444 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 SRSF6Q13247 344 aaKnown RBP4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 ALKBH6Q3KRA9 238 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 KHDC3LQ587J8 217 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 AWAT1Q58HT5 328 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 PRAMEF5Q5TYX0 476 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNF826PQ6ZT77 177 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 ASCL5Q7RTU5 278 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 MOGAT3Q86VF5 341 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 CBLN2Q8IUK8 224 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 FGFRL1Q8N441 504 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNF561Q8N587 486 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 OR52L2PQ8NGH6 319 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 OR10G4Q8NGN3 311 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 OR4S2Q8NH73 311 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 DTD1Q8TEA8 209 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 RAB39BQ96DA2 213 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 C14orf79Q96F83 325 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 BSCL2Q96G97 398 aaPredicted RBP4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 COQ2Q96H96 371 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 S1PR3Q99500 378 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 NIPSNAP3BQ9BS92 247 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 EGLN1Q9GZT9 426 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 FAM234AQ9H0X4 552 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 HIPK2Q9H2X6 1198 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 RBKSQ9H477 322 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 RNF7Q9UBF6 113 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 HSPB7Q9UBY9 170 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 PSG11Q9UQ72 335 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 SPTBN2O15020 2390 aa4.89□□□□□ -1.63
ATPAF1-204ENST00000474020 MYO7BQ6PIF6 2116 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 ARHGAP21Q5T5U3 1957 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 UBE2L5PA0A1B0GUS4 154 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 C7orf77A4D0Y5 90 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 DIRC3C9JPN6 131 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 C16orf97H3BN30 126 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 M0R1X1 148 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 ITGB1BP1O14713 200 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 TGOLN2O43493 480 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 SPRY3O43610 288 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 YPEL1O60688 119 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 MPDU1O75352 247 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 C1QL1O75973 258 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 PTBP3O95758 552 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 IFNA17P01571 189 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 IGKV1-5P01602 117 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 IFNA4P05014 189 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 METTL15P1P0C7V9 234 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 PTAFRP25105 342 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 G6PCP35575 357 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 NBL1P41271 181 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 GLIPR1P48060 266 aa4.88□□□□□ -1.63
ATPAF1-204ENST00000474020 PSMB3P49720 205 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms