RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 CLRN1P58418 232 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 CLEC12BQ2HXU8 276 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 TDRG1Q3Y452 100 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 SPATA45Q537H7 98 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 FBLN7Q53RD9 439 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 SLC25A47Q6Q0C1 308 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 LYG1Q8N1E2 194 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 TCTEX1D1Q8N7M0 179 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 OR4C5Q8NGB2 326 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 TXN2Q99757 166 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 WDR61Q9GZS3 305 aaKnown RBP8.54□□□□□ -1.04
APTX-216ENST00000472896 VSIRQ9H7M9 311 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 ZNF160Q9HCG1 818 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 MED29Q9NX70 200 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 ALKBH4Q9NXW9 302 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 ABI3Q9P2A4 366 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 LOC105371242A0A075B767 164 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 TRAV17A0A0B4J275 112 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 VSTM2BA6NLU5 285 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 IFNL4K9M1U5 179 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 CLDN14O95500 239 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 IGHG1P01857 330 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 CELA2AP08217 269 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 WNT2P09544 360 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 IGLC2P0DOY2 106 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 IGLC3P0DOY3 106 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 CRISP2P16562 243 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 IL11P20809 199 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 S100GP29377 79 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 GNRHRP30968 328 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 LHX2P50458 406 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 SUMO3P55854 103 aaPredicted RBP8.53□□□□□ -1.04
APTX-216ENST00000472896 PMP22Q01453 160 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 NSDHLQ15738 373 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 HLA-DQA1Q5Y7H0 255 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 OR4F5Q8NH21 305 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 OR5P3Q8WZ94 311 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 LYZL4Q96KX0 146 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 OR4F4Q96R69 305 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 ZDHHC11Q9H8X9 412 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 WDR54Q9H977 334 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 PATZ1Q9HBE1 687 aaKnown RBP8.53□□□□□ -1.04
APTX-216ENST00000472896 SLC35D1Q9NTN3 355 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 IL36GQ9NZH8 169 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 ANKHD1Q8IWZ3 2542 aaKnown RBP8.53□□□□□ -1.04
APTX-216ENST00000472896 ABCA2Q9BZC7 2435 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 SAA2-SAA4A0A096LPE2 208 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 TRBV9A0A0B4J1U6 114 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 IGHV2OR16-5A0A0B4J2B6 119 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 DIRC3C9JPN6 131 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 SLC33A1O00400 549 aaPredicted RBP8.53□□□□□ -1.04
APTX-216ENST00000472896 AQP7O14520 342 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 ZNHIT1O43257 154 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 PDE6DO43924 150 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 TNFSF4P23510 183 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 RPL19P84098 196 aaKnown RBP8.53□□□□□ -1.04
APTX-216ENST00000472896 PLCXD2Q0VAA5 305 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 MALLQ13021 153 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 CNN3Q15417 329 aaKnown RBP8.53□□□□□ -1.04
APTX-216ENST00000472896 Q6ZN92 141 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 C1orf122Q6ZSJ8 110 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 METTL27Q8N6F8 245 aaPredicted RBP8.53□□□□□ -1.04
APTX-216ENST00000472896 SIGLECL1Q8N7X8 197 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 ZNF709Q8N972 641 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 OR1L6Q8NGR2 347 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 ZNF721Q8TF20 911 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 SAMD10Q9BYL1 202 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 MRPL27Q9P0M9 148 aaKnown RBP8.53□□□□□ -1.04
APTX-216ENST00000472896 TAAR3PQ9P1P4 343 aa8.53□□□□□ -1.04
APTX-216ENST00000472896 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 A0A1B0GX78 115 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 ZNF814B7Z6K7 855 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 PDCD6O75340 191 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 HYPMO75409 117 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 IGKV3-11P04433 115 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 CDKN1AP38936 164 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 RHOGP84095 191 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 TMEM267Q0VDI3 215 aaPredicted RBP8.52□□□□□ -1.05
APTX-216ENST00000472896 RNF151Q2KHN1 245 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 SPIN3Q5JUX0 258 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 LHFPL2Q6ZUX7 228 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 WDFY1Q8IWB7 410 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 PRR22Q8IZ63 422 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 NRGNQ92686 78 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 TAF15Q92804 592 aaKnown RBP eCLIP8.52□□□□□ -1.05
APTX-216ENST00000472896 PIGTQ969N2 578 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 APH1AQ96BI3 265 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 TXNDC17Q9BRA2 123 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 CSTL1Q9H114 145 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 PSENENQ9NZ42 101 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 TP53TG3Q9ULZ0 132 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 PIGLQ9Y2B2 252 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 ZNF835Q9Y2P0 537 aa8.52□□□□□ -1.05
APTX-216ENST00000472896 MDFIC2A0A1B0GVS7 189 aa8.51□□□□□ -1.05
APTX-216ENST00000472896 LRP5LA4QPB2 252 aa8.51□□□□□ -1.05
APTX-216ENST00000472896 LIPT2A6NK58 231 aa8.51□□□□□ -1.05
APTX-216ENST00000472896 KIAA1324LA8MWY0 1029 aaPredicted RBP8.51□□□□□ -1.05
APTX-216ENST00000472896 H0YIG0 161 aa8.51□□□□□ -1.05
APTX-216ENST00000472896 NDUFS8O00217 210 aa8.51□□□□□ -1.05
APTX-216ENST00000472896 TRAPPC6AO75865 159 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms