RNA–Protein interactions for RNA: ENST00000472677.1

TRABD-206, Transcript of TraB domain containing, humanhuman

TSL 1 (best)

Gene TRABD, Length 1,661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-206ENST00000472677 KCTD9Q7L273 389 aa17.13■□□□□ 0.33
TRABD-206ENST00000472677 SLC25A42Q86VD7 318 aa17.13■□□□□ 0.33
TRABD-206ENST00000472677 OR2T10Q8NGZ9 312 aa17.13■□□□□ 0.33
TRABD-206ENST00000472677 JMJD1CQ15652 2540 aa17.13■□□□□ 0.33
TRABD-206ENST00000472677 LINC00473A8K010 186 aa17.13■□□□□ 0.33
TRABD-206ENST00000472677 MOSP00540 346 aa17.13■□□□□ 0.33
TRABD-206ENST00000472677 TMEM11P17152 192 aa17.13■□□□□ 0.33
TRABD-206ENST00000472677 UBA52P62987 128 aaKnown RBP17.13■□□□□ 0.33
TRABD-206ENST00000472677 C4orf46Q504U0 113 aa17.13■□□□□ 0.33
TRABD-206ENST00000472677 ZNF66Q6ZN08 573 aa17.13■□□□□ 0.33
TRABD-206ENST00000472677 TCTEX1D2Q8WW35 142 aa17.13■□□□□ 0.33
TRABD-206ENST00000472677 ALX4Q9H161 411 aaPredicted RBP17.13■□□□□ 0.33
TRABD-206ENST00000472677 PRELID3BQ9Y3B1 194 aa17.13■□□□□ 0.33
TRABD-206ENST00000472677 WASHC3Q9Y3C0 194 aa17.13■□□□□ 0.33
TRABD-206ENST00000472677 A6NDX4 124 aa17.12■□□□□ 0.33
TRABD-206ENST00000472677 PRAF2O60831 178 aa17.12■□□□□ 0.33
TRABD-206ENST00000472677 PIGPP57054 158 aa17.12■□□□□ 0.33
TRABD-206ENST00000472677 TAS2R31P59538 309 aa17.12■□□□□ 0.33
TRABD-206ENST00000472677 SRSF2Q01130 221 aaKnown RBP17.12■□□□□ 0.33
TRABD-206ENST00000472677 TMEM230Q96A57 120 aa17.12■□□□□ 0.33
TRABD-206ENST00000472677 EAF1Q96JC9 268 aaPredicted RBP17.12■□□□□ 0.33
TRABD-206ENST00000472677 SLC2A9Q9NRM0 540 aa17.12■□□□□ 0.33
TRABD-206ENST00000472677 SLC35D1Q9NTN3 355 aa17.12■□□□□ 0.33
TRABD-206ENST00000472677 ALG5Q9Y673 324 aa17.12■□□□□ 0.33
TRABD-206ENST00000472677 TRIM77I1YAP6 450 aa17.11■□□□□ 0.33
TRABD-206ENST00000472677 PGLYRP1O75594 196 aaPredicted RBP17.11■□□□□ 0.33
TRABD-206ENST00000472677 RNASE1P07998 156 aaKnown RBP17.11■□□□□ 0.33
TRABD-206ENST00000472677 OR4E1P0C645 316 aa17.11■□□□□ 0.33
TRABD-206ENST00000472677 RPL30P62888 115 aaKnown RBP17.11■□□□□ 0.33
TRABD-206ENST00000472677 TAGLNQ01995 201 aaKnown RBP17.11■□□□□ 0.33
TRABD-206ENST00000472677 CBX3Q13185 183 aa17.11■□□□□ 0.33
TRABD-206ENST00000472677 RTL8BQ17RB0 113 aa17.11■□□□□ 0.33
TRABD-206ENST00000472677 FBLN7Q53RD9 439 aa17.11■□□□□ 0.33
TRABD-206ENST00000472677 OR51H1Q8NH63 302 aa17.11■□□□□ 0.33
TRABD-206ENST00000472677 ZNF486Q96H40 463 aaPredicted RBP17.11■□□□□ 0.33
TRABD-206ENST00000472677 SEC22CQ9BRL7 303 aa17.11■□□□□ 0.33
TRABD-206ENST00000472677 IL5P05113 134 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 CATR1Q13166 79 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 EIF4EBP1Q13541 118 aaPredicted RBP17.1■□□□□ 0.33
TRABD-206ENST00000472677 EBI3Q14213 229 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 TMEM128Q5BJH2 165 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 OR2B11Q5JQS5 317 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 LIAT1Q6ZQX7 453 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 GPR137BO60478 399 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 FCGR3BO75015 233 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 IGKV1-16P04430 117 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 VAMP1P23763 118 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 PPP1R1AQ13522 171 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 PRIMA1Q86XR5 153 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 PDPNQ86YL7 162 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 OR52B4Q8NGK2 314 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 DDB2Q92466 427 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 RBM14Q96PK6 669 aaKnown RBP17.1■□□□□ 0.33
TRABD-206ENST00000472677 SLC25A33Q9BSK2 321 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 GPN1Q9HCN4 374 aaPredicted RBP17.1■□□□□ 0.33
TRABD-206ENST00000472677 RAB18Q9NP72 206 aa17.1■□□□□ 0.33
TRABD-206ENST00000472677 FAM181BA6NEQ2 426 aa17.09■□□□□ 0.33
TRABD-206ENST00000472677 NCBP2LA6PVI3 153 aaKnown RBP17.09■□□□□ 0.33
TRABD-206ENST00000472677 RNF212BA8MTL3 300 aa17.09■□□□□ 0.33
TRABD-206ENST00000472677 RRASP10301 218 aa17.09■□□□□ 0.33
TRABD-206ENST00000472677 CCDC71LQ8N9Z2 235 aa17.09■□□□□ 0.33
TRABD-206ENST00000472677 FLYWCH2Q96CP2 140 aaKnown RBP17.09■□□□□ 0.33
TRABD-206ENST00000472677 TEX13DA0A0J9YY54 714 aaPredicted RBP17.08■□□□□ 0.32
TRABD-206ENST00000472677 C7orf66A4D0T2 115 aa17.08■□□□□ 0.32
TRABD-206ENST00000472677 OR2F2O95006 317 aa17.08■□□□□ 0.32
TRABD-206ENST00000472677 CRYBA1P05813 215 aa17.08■□□□□ 0.32
TRABD-206ENST00000472677 UBE2MP61081 183 aaKnown RBP17.08■□□□□ 0.32
TRABD-206ENST00000472677 RPS16P62249 146 aaKnown RBP17.08■□□□□ 0.32
TRABD-206ENST00000472677 DHODHQ02127 395 aa17.08■□□□□ 0.32
TRABD-206ENST00000472677 DHRS2Q13268 280 aa17.08■□□□□ 0.32
TRABD-206ENST00000472677 TBC1D26Q86UD7 250 aa17.08■□□□□ 0.32
TRABD-206ENST00000472677 SGPP2Q8IWX5 399 aa17.08■□□□□ 0.32
TRABD-206ENST00000472677 OR4C13Q8NGP0 309 aa17.08■□□□□ 0.32
TRABD-206ENST00000472677 RITA1Q96K30 269 aa17.08■□□□□ 0.32
TRABD-206ENST00000472677 CRYM-AS1A6NIL9 109 aa17.07■□□□□ 0.32
TRABD-206ENST00000472677 CHST1O43916 411 aa17.07■□□□□ 0.32
TRABD-206ENST00000472677 HLA-AP01891 365 aaKnown RBP17.07■□□□□ 0.32
TRABD-206ENST00000472677 RND3P61587 244 aa17.07■□□□□ 0.32
TRABD-206ENST00000472677 LYG2Q86SG7 212 aa17.07■□□□□ 0.32
TRABD-206ENST00000472677 SPAG16Q8N0X2 631 aa17.07■□□□□ 0.32
TRABD-206ENST00000472677 C9orf170A2RU37 121 aa17.07■□□□□ 0.32
TRABD-206ENST00000472677 MPPED1O15442 326 aa17.07■□□□□ 0.32
TRABD-206ENST00000472677 CRYZL1O95825 349 aa17.07■□□□□ 0.32
TRABD-206ENST00000472677 SUPT4H1P63272 117 aaKnown RBP17.07■□□□□ 0.32
TRABD-206ENST00000472677 MMDQ15546 238 aa17.07■□□□□ 0.32
TRABD-206ENST00000472677 C16orf82Q7Z2V1 217 aa17.07■□□□□ 0.32
TRABD-206ENST00000472677 Q8N6K4 173 aa17.07■□□□□ 0.32
TRABD-206ENST00000472677 OR51J1Q9H342 316 aa17.07■□□□□ 0.32
TRABD-206ENST00000472677 SHOXO15266 292 aa17.06■□□□□ 0.32
TRABD-206ENST00000472677 CREBL2O60519 120 aaPredicted RBP17.06■□□□□ 0.32
TRABD-206ENST00000472677 F2RP25116 425 aa17.06■□□□□ 0.32
TRABD-206ENST00000472677 KIR2DS2P43631 304 aa17.06■□□□□ 0.32
TRABD-206ENST00000472677 F2RL1P55085 397 aa17.06■□□□□ 0.32
TRABD-206ENST00000472677 DHRS7BQ6IAN0 325 aaPredicted RBP17.06■□□□□ 0.32
TRABD-206ENST00000472677 CADM3Q8N126 398 aa17.06■□□□□ 0.32
TRABD-206ENST00000472677 OR8H1Q8NGG4 311 aa17.06■□□□□ 0.32
TRABD-206ENST00000472677 OR4S2Q8NH73 311 aa17.06■□□□□ 0.32
TRABD-206ENST00000472677 ZNF431Q8TF32 576 aaPredicted RBP17.06■□□□□ 0.32
TRABD-206ENST00000472677 CASTOR1Q8WTX7 329 aa17.06■□□□□ 0.32
TRABD-206ENST00000472677 NAA60Q9H7X0 242 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms