RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 CISD3P0C7P0 127 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 LINC00869P0C866 280 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 EFNB1P98172 346 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 UQCC3Q6UW78 93 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 WNT10AQ9GZT5 417 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TLNRD1Q9H1K6 362 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 CEACAM4O75871 244 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 AWAT1Q58HT5 328 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 YAE1D1Q9NRH1 226 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 UPK3AO75631 287 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TMEM50BP56557 158 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 STHQ8IWL8 128 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 SHISA5Q8N114 240 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 C7orf71A4D174 169 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 WDFY1Q8IWB7 410 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 SLC17A5Q9NRA2 495 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 SPG11Q96JI7 2443 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 LCN2P80188 198 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 PLPPR5Q32ZL2 321 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 PRSS54Q6PEW0 395 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 VN1R4Q7Z5H5 301 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 DSCAML1Q8TD84 2053 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 INS-IGF2F8WCM5 200 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 INSP01308 110 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 RAG2P55895 527 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 LSM6P62312 80 aaKnown RBP11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 ATP5G2Q06055 141 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 CD300CQ08708 224 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 SH3BGRL3Q9H299 93 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 COX11Q9Y6N1 276 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 LOC105371242A0A075B767 164 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 F8WEM9 126 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 HBZP02008 142 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 MRPL24Q96A35 216 aaKnown RBP11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 EML6Q6ZMW3 1958 aa11.47□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 A0A1W2PQM1 296 aa11.46□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 CD74P04233 296 aa11.46□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 MMP9P14780 707 aa11.46□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 IGHV3OR16-8A0A075B7F1 116 aa11.46□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 EDIL3O43854 480 aa11.46□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 MRGPRGQ86SM5 289 aa11.46□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 CREBBPQ92793 2442 aa11.46□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 PPIAL4CA0A0B4J2A2 164 aa11.46□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 PPIAL4GP0DN37 164 aa11.46□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 HIST1H1AQ02539 215 aaPredicted RBP11.46□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 J3QT63 122 aa11.46□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TMEM136Q6ZRR5 245 aa11.46□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 LINC01465Q8N7H1 131 aa11.46□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 LINC01587Q99440 93 aa11.46□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 GBF1Q92538 1859 aa11.46□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 TJP1Q07157 1748 aa11.46□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 KCNE1BA0A087WTH5 132 aa11.46□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 SPINT1O43278 529 aa11.46□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 CD99P14209 185 aa11.46□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 LDLRAD4O15165 306 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 PRB3Q04118 309 aaPredicted RBP11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 C12orf73Q69YU5 71 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 OR2K2Q8NGT1 345 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 TMEM70Q9BUB7 260 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 MRPL16Q9NX20 251 aaKnown RBP11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 PXMP4Q9Y6I8 212 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 OPN4Q9UHM6 478 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 IL11P20809 199 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ANOS1P23352 680 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ISXQ2M1V0 245 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ASCL4Q6XD76 172 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 SMRP1Q8NCR6 262 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 GDF9O60383 454 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 CD8AP01732 235 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 AMY1AP04745 511 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ERGP11308 486 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 CLPPQ16740 277 aaPredicted RBP11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 IL19Q9UHD0 177 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 RNF115Q9Y4L5 304 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 LEUTXA8MZ59 168 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 CDC20Q12834 499 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 NCOA6Q14686 2063 aaPredicted RBP11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 FOCADQ5VW36 1801 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 CKS1BP61024 79 aa11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 RNASEH2CQ8TDP1 164 aaKnown RBP11.45□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 TMEM210A6NLX4 147 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 DLL1O00548 723 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 CTSDP07339 412 aaPredicted RBP11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 RGPD4Q7Z3J3 1758 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 H3BRM9 83 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ZP3P21754 424 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 EWSR1Q01844 656 aaKnown RBP eCLIP11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 NSUN5P1Q3KNT7 163 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 SCNM1Q9BWG6 230 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 SF3B5Q9BWJ5 86 aaKnown RBP11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 FGF5P12034 268 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 FXYD3Q14802 87 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 LBHQ53QV2 105 aaPredicted RBP11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 NPVFQ9HCQ7 196 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 RPL8P62917 257 aaKnown RBP11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 NUDT16L1Q9BRJ7 211 aaKnown RBP11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 MUC21A0A0G2JKD1 596 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 MUC21A0A140T8X8 626 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms