RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 DEFA4P12838 97 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 ATF4P18848 351 aaPredicted RBP5.07□□□□□ -1.6
HDAC1-204ENST00000471488 CALB2P22676 271 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 CAPGP40121 348 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 TCTAP57738 103 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 MRPL28Q13084 256 aaKnown RBP5.07□□□□□ -1.6
HDAC1-204ENST00000471488 ATP6AP1Q15904 470 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 ZNF124Q15973 351 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 C10orf55Q5SWW7 151 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 XAF1Q6GPH4 301 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 SIGIRRQ6IA17 410 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 OR4A47Q6IF82 309 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 OR10K2Q6IF99 312 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 ZNF554Q86TJ5 538 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 GAPTQ8N292 157 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 SYS1Q8N2H4 156 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 ZFP41Q8N8Y5 198 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 EEF1AKMT3Q96AZ1 226 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 Q96M66 194 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 HDHD3Q9BSH5 251 aaPredicted RBP5.07□□□□□ -1.6
HDAC1-204ENST00000471488 OR2D2Q9H210 308 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 PLEKHJ1Q9NW61 149 aa5.07□□□□□ -1.6
HDAC1-204ENST00000471488 EXOGQ9Y2C4 368 aaKnown RBP5.07□□□□□ -1.6
HDAC1-204ENST00000471488 KIR2DL5BA0A0G2JN68 375 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 KIR2DL5BA0A0G2JPC4 375 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 MPTX1A8MV57 137 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 C16orf90A8MZG2 172 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 J3QRE1 110 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 J3QRK9 145 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 RTL8CO15255 209 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 GYG2O15488 501 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 ZNF207O43670 478 aaKnown RBP5.06□□□□□ -1.6
HDAC1-204ENST00000471488 S1PR2O95136 353 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 CRYZL1O95825 349 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 REG1AP05451 166 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 SCTP09683 121 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 GPR183P32249 361 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 GYS2P54840 703 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 GNGT1P63211 74 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 HLA-DRB3P79483 266 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 PRSS8Q16651 343 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 OR2B11Q5JQS5 317 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 LY6G6FQ5SQ64 297 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 MEDAGQ5VYS4 303 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 LAMTOR1Q6IAA8 161 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 UNQ9165/PRO28630Q6UXU0 137 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 ZNF767PQ75MW2 155 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 NR2C2APQ86WQ0 139 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 GPHB5Q86YW7 130 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 KIR2DL5AQ8N109 375 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 SVOPQ8N4V2 548 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 OR6M1Q8NGM8 313 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 KIR2DL5BQ8NHK3 375 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 GALNT14Q96FL9 552 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 OR14A2Q96R54 314 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 SPIN2AQ99865 258 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 SPAG8Q99932 426 aaPredicted RBP5.06□□□□□ -1.6
HDAC1-204ENST00000471488 SPIN2BQ9BPZ2 258 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 C20orf24Q9BUV8 137 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 GABARAPL3Q9BY60 117 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 CSTL1Q9H114 145 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 KCNK15Q9H427 330 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 MAP6D1Q9H9H5 199 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 RDH8Q9NYR8 311 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 OAZ3Q9UMX2 235 aa5.06□□□□□ -1.6
HDAC1-204ENST00000471488 TRBV9A0A0B4J1U6 114 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 TRAV25A0A0B4J276 109 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 TCRBV3S1A0A5B6 114 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 OR4C46A6NHA9 309 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 FAM90A7PA6NKC0 464 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 SRRM4A7MD48 611 aaKnown RBP5.05□□□□□ -1.6
HDAC1-204ENST00000471488 C11orf94C9JXX5 98 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 PROP1O75360 226 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 IFNA10P01566 189 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 CLEC3BP05452 202 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 CRYGBP07316 175 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 CD3GP09693 182 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 CRHBPP24387 322 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 HLA-DMBP28068 263 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 ODF3L2Q3SX64 289 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 FAM209BQ5JX69 171 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 OR2G6Q5TZ20 316 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 GLT8D1Q68CQ7 371 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 RPL22L1Q6P5R6 122 aaKnown RBP5.05□□□□□ -1.6
HDAC1-204ENST00000471488 PLET1Q6UQ28 207 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 TMPRSS11AQ6ZMR5 421 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 Q6ZTC4 211 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 CEACAM19Q7Z692 300 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 SLC25A42Q86VD7 318 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 OR52I1Q8NGK6 324 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 TRUB1Q8WWH5 349 aaKnown RBP5.05□□□□□ -1.6
HDAC1-204ENST00000471488 GGHQ92820 318 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 CCDC140Q96MF4 163 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 AGMATQ9BSE5 352 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 NICN1Q9BSH3 213 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 CHRDL1Q9BU40 450 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 GABARAPL1Q9H0R8 117 aa5.05□□□□□ -1.6
HDAC1-204ENST00000471488 ZNF430Q9H8G1 570 aaPredicted RBP5.05□□□□□ -1.6
HDAC1-204ENST00000471488 MRPL27Q9P0M9 148 aaKnown RBP5.05□□□□□ -1.6
HDAC1-204ENST00000471488 AK3Q9UIJ7 227 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms