RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 LINC00310P59036 64 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 MRPS15P82914 257 aaKnown RBP6.92□□□□□ -1.3
CPSF4-211ENST00000471455 TPBGQ13641 420 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 VMA21Q3ZAQ7 101 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 RBM48Q5RL73 367 aaKnown RBP6.92□□□□□ -1.3
CPSF4-211ENST00000471455 C1orf100Q5SVJ3 147 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 RNLSQ5VYX0 342 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 IL34Q6ZMJ4 242 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 C5orf24Q7Z6I8 188 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 FAM223AQ8IWN6 122 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 PQLC1Q8N2U9 271 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 MS4A15Q8N5U1 240 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 ZNF383Q8NA42 475 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 ZNF485Q8NCK3 441 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 OR6M1Q8NGM8 313 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 GGHQ92820 318 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 HARBI1Q96MB7 349 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 RETNQ9HD89 108 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 C8orf4Q9NR00 106 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 OR1A1Q9P1Q5 309 aa6.92□□□□□ -1.3
CPSF4-211ENST00000471455 ACTL6BO94805 426 aa6.91□□□□□ -1.3
CPSF4-211ENST00000471455 HTR2CP28335 458 aa6.91□□□□□ -1.3
CPSF4-211ENST00000471455 ST3GAL4Q11206 333 aa6.91□□□□□ -1.3
CPSF4-211ENST00000471455 DYRK1AQ13627 763 aa6.91□□□□□ -1.3
CPSF4-211ENST00000471455 OR10K2Q6IF99 312 aa6.91□□□□□ -1.3
CPSF4-211ENST00000471455 SLC16A13Q7RTY0 426 aa6.91□□□□□ -1.3
CPSF4-211ENST00000471455 CYGBQ8WWM9 190 aa6.91□□□□□ -1.3
CPSF4-211ENST00000471455 FAM110AQ9BQ89 295 aa6.91□□□□□ -1.3
CPSF4-211ENST00000471455 CENPOQ9BU64 300 aa6.91□□□□□ -1.3
CPSF4-211ENST00000471455 PARP12Q9H0J9 701 aaKnown RBP6.91□□□□□ -1.3
CPSF4-211ENST00000471455 SRD5A3Q9H8P0 318 aa6.91□□□□□ -1.3
CPSF4-211ENST00000471455 S100A14Q9HCY8 104 aa6.91□□□□□ -1.3
CPSF4-211ENST00000471455 RDH8Q9NYR8 311 aa6.91□□□□□ -1.3
CPSF4-211ENST00000471455 TECRQ9NZ01 308 aaKnown RBP6.91□□□□□ -1.3
CPSF4-211ENST00000471455 AK3Q9UIJ7 227 aa6.91□□□□□ -1.3
CPSF4-211ENST00000471455 HSF4Q9ULV5 492 aa6.91□□□□□ -1.3
CPSF4-211ENST00000471455 PLA2G2DQ9UNK4 145 aa6.91□□□□□ -1.3
CPSF4-211ENST00000471455 ALMS1Q8TCU4 4167 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 TMEM14DPA8MWL7 114 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 OR11H12B2RN74 326 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 TRDCB7Z8K6 153 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 DIRAS3O95661 229 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 OR9G9P0C7N8 305 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 RHOGP84095 191 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 ATP5G2Q06055 141 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 UNC119Q13432 240 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 EXOSC2Q13868 293 aaKnown RBP6.9□□□□□ -1.3
CPSF4-211ENST00000471455 GUCA2BQ16661 112 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 CD300EQ496F6 205 aaPredicted RBP6.9□□□□□ -1.3
CPSF4-211ENST00000471455 ACSM3Q53FZ2 586 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 HSD17B12Q53GQ0 312 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 LINC00322Q6ZN03 302 aaPredicted RBP6.9□□□□□ -1.3
CPSF4-211ENST00000471455 SLC25A42Q86VD7 318 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 ADAD2Q8NCV1 583 aaKnown RBP6.9□□□□□ -1.3
CPSF4-211ENST00000471455 OR4A4PQ8NGN8 299 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 LINC00476Q8WZB0 136 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 ADTRPQ96IZ2 230 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 CMSS1Q9BQ75 279 aaKnown RBP6.9□□□□□ -1.3
CPSF4-211ENST00000471455 NICN1Q9BSH3 213 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 OR2D2Q9H210 308 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 PLGRKTQ9HBL7 147 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 Q9N2K0 584 aa6.9□□□□□ -1.3
CPSF4-211ENST00000471455 IZUMO1RA6ND01 250 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 NUPR2A6NF83 97 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 MSGN1A6NI15 193 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 IGLV2-23P01705 113 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 TRBV12-3P01733 135 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 CRYGBP07316 175 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 SCTP09683 121 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 MECP2P51608 486 aaKnown RBP6.89□□□□□ -1.31
CPSF4-211ENST00000471455 UBE2KP61086 200 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 PJVKQ0ZLH3 352 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 TNXAQ16473 311 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 ANKRD55Q3KP44 614 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 TMEM177Q53S58 311 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 AHSA2Q719I0 299 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 LRRTM1Q86UE6 522 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 TEX45Q8NA69 505 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 NECAP1Q8NC96 275 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 OR56B1Q8NGI3 324 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 OR10J5Q8NHC4 309 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 SRSF12Q8WXF0 261 aaKnown RBP6.89□□□□□ -1.31
CPSF4-211ENST00000471455 ACOT12Q8WYK0 555 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 SPIN2AQ99865 258 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 SPIN2BQ9BPZ2 258 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 HDHD3Q9BSH5 251 aaPredicted RBP6.89□□□□□ -1.31
CPSF4-211ENST00000471455 MND1Q9BWT6 205 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 LPAR5Q9H1C0 372 aa6.89□□□□□ -1.31
CPSF4-211ENST00000471455 RBM7Q9Y580 266 aaKnown RBP6.89□□□□□ -1.31
CPSF4-211ENST00000471455 HYDINQ4G0P3 5121 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.88□□□□□ -1.31
CPSF4-211ENST00000471455 CXorf65A6NEN9 183 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 BMPR1BO00238 502 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 SOCS1O15524 211 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 FABP7O15540 132 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 GGCTO75223 188 aaKnown RBP6.88□□□□□ -1.31
CPSF4-211ENST00000471455 PROP1O75360 226 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 NDUFB8O95169 186 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 CD3GP09693 182 aa6.88□□□□□ -1.31
CPSF4-211ENST00000471455 SSBP2P81877 361 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms