RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.64□□□□□ -1.35
XRN1-208ENST00000470537 NECAP1Q8NC96 275 aa6.64□□□□□ -1.35
XRN1-208ENST00000470537 ADAD2Q8NCV1 583 aaKnown RBP6.64□□□□□ -1.35
XRN1-208ENST00000470537 RHOXF1Q8NHV9 184 aa6.64□□□□□ -1.35
XRN1-208ENST00000470537 SETD6Q8TBK2 473 aa6.64□□□□□ -1.35
XRN1-208ENST00000470537 PTX4Q96A99 478 aa6.64□□□□□ -1.35
XRN1-208ENST00000470537 SLC29A1Q99808 456 aa6.64□□□□□ -1.35
XRN1-208ENST00000470537 SPIN2AQ99865 258 aa6.64□□□□□ -1.35
XRN1-208ENST00000470537 SPIN2BQ9BPZ2 258 aa6.64□□□□□ -1.35
XRN1-208ENST00000470537 AMBNQ9NP70 447 aa6.64□□□□□ -1.35
XRN1-208ENST00000470537 SLC35D1Q9NTN3 355 aa6.64□□□□□ -1.35
XRN1-208ENST00000470537 PLEKHJ1Q9NW61 149 aa6.64□□□□□ -1.35
XRN1-208ENST00000470537 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.63□□□□□ -1.35
XRN1-208ENST00000470537 A0A0J9YWU9 116 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 TRBV5-5A0A0J9YX44 114 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 MSGN1A6NI15 193 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 C2orf70A6NJV1 201 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 SAC3D1A6NKF1 404 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 SHOXO15266 292 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 SPRY2O43597 315 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 GSTT2P0CG29 244 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 GSTT2BP0CG30 244 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 LIMS3P0CW19 117 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 LIMS4P0CW20 117 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 CBLN1P23435 193 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 SERPINB10P48595 397 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 TCTAP57738 103 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 TAS2R43P59537 309 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 RHOGP84095 191 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 ZIK1Q3SY52 487 aaPredicted RBP6.63□□□□□ -1.35
XRN1-208ENST00000470537 VMA21Q3ZAQ7 101 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 ZNF57Q68EA5 555 aaPredicted RBP6.63□□□□□ -1.35
XRN1-208ENST00000470537 SIGIRRQ6IA17 410 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 LYG2Q86SG7 212 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 GPHB5Q86YW7 130 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 C10orf67Q8IYJ2 551 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 SLC38A6Q8IZM9 456 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 TEX45Q8NA69 505 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 KCNG3Q8TAE7 436 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 SLC7A6OSQ96CW6 309 aaPredicted RBP6.63□□□□□ -1.35
XRN1-208ENST00000470537 HARBI1Q96MB7 349 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 FAAP24Q9BTP7 215 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 CENPOQ9BU64 300 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 C11orf54Q9H0W9 315 aaPredicted RBP6.63□□□□□ -1.35
XRN1-208ENST00000470537 FGF20Q9NP95 211 aaPredicted RBP6.63□□□□□ -1.35
XRN1-208ENST00000470537 FRAS1Q86XX4 4008 aa6.63□□□□□ -1.35
XRN1-208ENST00000470537 TRAV8-7A0A075B6U6 113 aa6.62□□□□□ -1.35
XRN1-208ENST00000470537 TRAV25A0A0B4J276 109 aa6.62□□□□□ -1.35
XRN1-208ENST00000470537 BMPR1BO00238 502 aa6.62□□□□□ -1.35
XRN1-208ENST00000470537 DYNC1I1O14576 645 aa6.62□□□□□ -1.35
XRN1-208ENST00000470537 NAPSAO96009 420 aa6.62□□□□□ -1.35
XRN1-208ENST00000470537 DHFRP00374 187 aa6.62□□□□□ -1.35
XRN1-208ENST00000470537 TRBV12-3P01733 135 aa6.62□□□□□ -1.35
XRN1-208ENST00000470537 IFNA4P05014 189 aa6.62□□□□□ -1.35
XRN1-208ENST00000470537 GABRB1P18505 474 aa6.62□□□□□ -1.35
XRN1-208ENST00000470537 EXOSC2Q13868 293 aaKnown RBP6.62□□□□□ -1.35
XRN1-208ENST00000470537 RBPMS2Q6ZRY4 209 aaKnown RBP6.62□□□□□ -1.35
XRN1-208ENST00000470537 RPP25LQ8N5L8 163 aaKnown RBP6.62□□□□□ -1.35
XRN1-208ENST00000470537 STPG3Q8N7X2 389 aa6.62□□□□□ -1.35
XRN1-208ENST00000470537 ZNF383Q8NA42 475 aa6.62□□□□□ -1.35
XRN1-208ENST00000470537 MARC2Q969Z3 335 aa6.62□□□□□ -1.35
XRN1-208ENST00000470537 TMEM59Q9BXS4 323 aa6.62□□□□□ -1.35
XRN1-208ENST00000470537 MFFQ9GZY8 342 aa6.62□□□□□ -1.35
XRN1-208ENST00000470537 TMA7Q9Y2S6 64 aaKnown RBP6.62□□□□□ -1.35
XRN1-208ENST00000470537 PCLOQ9Y6V0 5065 aa6.62□□□□□ -1.35
XRN1-208ENST00000470537 PLECQ15149 4684 aaKnown RBP6.61□□□□□ -1.35
XRN1-208ENST00000470537 TRBV6-6A0A0A6YYG2 114 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 TRBV9A0A0B4J1U6 114 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 KIR2DL5BA0A0G2JN68 375 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 KIR2DL5BA0A0G2JPC4 375 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 LOC100130705A0A1B0GUX0 176 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 ZNF320A2RRD8 509 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 M0R1X1 148 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 EI24O14681 340 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 CIB2O75838 187 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 ATP5HO75947 161 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 RPS27AP62979 156 aaKnown RBP6.61□□□□□ -1.35
XRN1-208ENST00000470537 MRPS15P82914 257 aaKnown RBP6.61□□□□□ -1.35
XRN1-208ENST00000470537 PJVKQ0ZLH3 352 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 MED22Q15528 200 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 C15orf32Q32M92 178 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 OR2G6Q5TZ20 316 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 XAF1Q6GPH4 301 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 ZNF880Q6PDB4 577 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 C6orf201Q7Z4U5 140 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 KIR2DL5AQ8N109 375 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 KIR2DL5BQ8NHK3 375 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 PHLDA1Q8WV24 401 aaPredicted RBP6.61□□□□□ -1.35
XRN1-208ENST00000470537 ORAI1Q96D31 301 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 ADTRPQ96IZ2 230 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 URM1Q9BTM9 101 aaKnown RBP6.61□□□□□ -1.35
XRN1-208ENST00000470537 C6orf62Q9GZU0 229 aaPredicted RBP6.61□□□□□ -1.35
XRN1-208ENST00000470537 PARP12Q9H0J9 701 aaKnown RBP6.61□□□□□ -1.35
XRN1-208ENST00000470537 AKIP1Q9NQ31 210 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 ZNF230Q9UIE0 474 aaPredicted RBP6.61□□□□□ -1.35
XRN1-208ENST00000470537 ALMS1Q8TCU4 4167 aa6.61□□□□□ -1.35
XRN1-208ENST00000470537 TRBV5-7A0A0A0MS05 114 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 A0A1W2PPK0 400 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 DPPA5A6NC42 116 aa6.6□□□□□ -1.35
XRN1-208ENST00000470537 CRYGBP07316 175 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms