RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 TCTEX1D1Q8N7M0 179 aa11.04□□□□□ -0.64
TOP3B-215ENST00000470338 HARBI1Q96MB7 349 aa11.04□□□□□ -0.64
TOP3B-215ENST00000470338 P2RX4Q99571 388 aa11.04□□□□□ -0.64
TOP3B-215ENST00000470338 KLK15Q9H2R5 256 aa11.04□□□□□ -0.64
TOP3B-215ENST00000470338 TPSG1Q9NRR2 321 aa11.04□□□□□ -0.64
TOP3B-215ENST00000470338 MEIS3P1A6NDR6 274 aa11.03□□□□□ -0.64
TOP3B-215ENST00000470338 SHOXO15266 292 aa11.03□□□□□ -0.64
TOP3B-215ENST00000470338 CA2P00918 260 aa11.03□□□□□ -0.64
TOP3B-215ENST00000470338 IGLL1P15814 213 aa11.03□□□□□ -0.64
TOP3B-215ENST00000470338 NAT1P18440 290 aa11.03□□□□□ -0.64
TOP3B-215ENST00000470338 AADACP22760 399 aa11.03□□□□□ -0.64
TOP3B-215ENST00000470338 PRSS3P35030 304 aa11.03□□□□□ -0.64
TOP3B-215ENST00000470338 RPL30P62888 115 aaKnown RBP11.03□□□□□ -0.64
TOP3B-215ENST00000470338 SSBP2P81877 361 aaPredicted RBP11.03□□□□□ -0.64
TOP3B-215ENST00000470338 TMEM267Q0VDI3 215 aaPredicted RBP11.03□□□□□ -0.64
TOP3B-215ENST00000470338 PJVKQ0ZLH3 352 aa11.03□□□□□ -0.64
TOP3B-215ENST00000470338 CDK10Q15131 360 aa11.03□□□□□ -0.64
TOP3B-215ENST00000470338 MSMO1Q15800 293 aa11.03□□□□□ -0.64
TOP3B-215ENST00000470338 PDLIM3Q53GG5 364 aaPredicted RBP11.03□□□□□ -0.64
TOP3B-215ENST00000470338 OVCH2Q7RTZ1 564 aa11.03□□□□□ -0.64
TOP3B-215ENST00000470338 ZNF491Q8N8L2 437 aa11.03□□□□□ -0.64
TOP3B-215ENST00000470338 OSR1Q8TAX0 266 aaPredicted RBP11.03□□□□□ -0.64
TOP3B-215ENST00000470338 GIMAP1Q8WWP7 306 aa11.03□□□□□ -0.64
TOP3B-215ENST00000470338 RAX2Q96IS3 184 aa11.03□□□□□ -0.64
TOP3B-215ENST00000470338 UBE2E2Q96LR5 201 aa11.03□□□□□ -0.64
TOP3B-215ENST00000470338 PRKDCP78527 4128 aaKnown RBP11.02□□□□□ -0.64
TOP3B-215ENST00000470338 SMIM31A0A1B0GVY4 71 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 ARPC1BO15143 372 aaKnown RBP11.02□□□□□ -0.65
TOP3B-215ENST00000470338 SOX15O60248 233 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 HPGDSO60760 199 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 CRYZL1O95825 349 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 PPYP01298 95 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 FCER2P06734 321 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 ZNF182P17025 639 aaPredicted RBP11.02□□□□□ -0.65
TOP3B-215ENST00000470338 ELK1P19419 428 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 RAB9AP51151 201 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 UBE2KP61086 200 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 FXYD3Q14802 87 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 ECSCRQ19T08 205 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 MRGPRG-AS1Q2M3A8 158 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 MZT2AQ6P582 158 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 TMEM65Q6PI78 240 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 TEX45Q8NA69 505 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 C4orf3Q8WVX3 66 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 RCC1LQ96I51 464 aaKnown RBP11.02□□□□□ -0.65
TOP3B-215ENST00000470338 HSD17B10Q99714 261 aaKnown RBP11.02□□□□□ -0.65
TOP3B-215ENST00000470338 FAM103A1Q9BTL3 118 aaKnown RBP11.02□□□□□ -0.65
TOP3B-215ENST00000470338 IFT46Q9NQC8 304 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 FOXA2Q9Y261 457 aaPredicted RBP11.02□□□□□ -0.65
TOP3B-215ENST00000470338 PRELID3BQ9Y3B1 194 aa11.02□□□□□ -0.65
TOP3B-215ENST00000470338 A0A1W2PN81 502 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 CCL24O00175 119 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 FCGR3BO75015 233 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 DUS4LO95620 317 aaKnown RBP11.01□□□□□ -0.65
TOP3B-215ENST00000470338 CHRNA7P36544 502 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 BRWD1-AS2P59051 145 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 RUNX1Q01196 453 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 UNQ5815/PRO19632Q6UWF5 114 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 DHRS11Q6UWP2 260 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 ZNF66Q6ZN08 573 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 KCTD9Q7L273 389 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 LYSMD2Q8IV50 215 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 MFSD4AQ8N468 514 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 ZBTB34Q8NCN2 500 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 LFNGQ8NES3 379 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 OR5M8Q8NGP6 311 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 GPX8Q8TED1 209 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 ABHD5Q8WTS1 349 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 SECTM1Q8WVN6 248 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 AP3S1Q92572 193 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 ARPC1AQ92747 370 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 CCL28Q9NRJ3 127 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 VSIG4Q9Y279 399 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 A3GALT2U3KPV4 340 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 TGP01266 2768 aa11.01□□□□□ -0.65
TOP3B-215ENST00000470338 I3L521 148 aa11□□□□□ -0.65
TOP3B-215ENST00000470338 RFX2P48378 723 aa11□□□□□ -0.65
TOP3B-215ENST00000470338 DYRK1AQ13627 763 aa11□□□□□ -0.65
TOP3B-215ENST00000470338 DEFB136Q30KP8 78 aa11□□□□□ -0.65
TOP3B-215ENST00000470338 VMA21Q3ZAQ7 101 aa11□□□□□ -0.65
TOP3B-215ENST00000470338 ACTBL2Q562R1 376 aa11□□□□□ -0.65
TOP3B-215ENST00000470338 PYHIN1Q6K0P9 492 aa11□□□□□ -0.65
TOP3B-215ENST00000470338 DUX3Q96PT4 197 aa11□□□□□ -0.65
TOP3B-215ENST00000470338 SCPEP1Q9HB40 452 aa11□□□□□ -0.65
TOP3B-215ENST00000470338 ADAM30Q9UKF2 790 aa11□□□□□ -0.65
TOP3B-215ENST00000470338 MRPS7Q9Y2R9 242 aaKnown RBP11□□□□□ -0.65
TOP3B-215ENST00000470338 SULT1C2O00338 296 aa10.99□□□□□ -0.65
TOP3B-215ENST00000470338 CNIH1O95406 144 aa10.99□□□□□ -0.65
TOP3B-215ENST00000470338 TAS2R46P59540 309 aa10.99□□□□□ -0.65
TOP3B-215ENST00000470338 FHL3Q13643 280 aa10.99□□□□□ -0.65
TOP3B-215ENST00000470338 SPCS2Q15005 226 aa10.99□□□□□ -0.65
TOP3B-215ENST00000470338 PRSS8Q16651 343 aa10.99□□□□□ -0.65
TOP3B-215ENST00000470338 FOXB2Q5VYV0 432 aa10.99□□□□□ -0.65
TOP3B-215ENST00000470338 GRPEL2Q8TAA5 225 aa10.99□□□□□ -0.65
TOP3B-215ENST00000470338 TCTEX1D2Q8WW35 142 aa10.99□□□□□ -0.65
TOP3B-215ENST00000470338 TMEM68Q96MH6 324 aa10.99□□□□□ -0.65
TOP3B-215ENST00000470338 BCL7BQ9BQE9 202 aa10.99□□□□□ -0.65
TOP3B-215ENST00000470338 DCUN1D5Q9BTE7 237 aa10.99□□□□□ -0.65
TOP3B-215ENST00000470338 SLC5A7Q9GZV3 580 aa10.99□□□□□ -0.65
TOP3B-215ENST00000470338 GNB4Q9HAV0 340 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms