RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 CIB1Q99828 191 aa8.76□□□□□ -1.01
LSM2-209ENST00000470083 SPIN2AQ99865 258 aa8.76□□□□□ -1.01
LSM2-209ENST00000470083 SPIN2BQ9BPZ2 258 aa8.76□□□□□ -1.01
LSM2-209ENST00000470083 RNF126Q9BV68 326 aa8.76□□□□□ -1.01
LSM2-209ENST00000470083 C6orf62Q9GZU0 229 aaPredicted RBP8.76□□□□□ -1.01
LSM2-209ENST00000470083 MRPL27Q9P0M9 148 aaKnown RBP8.76□□□□□ -1.01
LSM2-209ENST00000470083 ZNF221Q9UK13 617 aa8.76□□□□□ -1.01
LSM2-209ENST00000470083 EXOGQ9Y2C4 368 aaKnown RBP8.76□□□□□ -1.01
LSM2-209ENST00000470083 TRAV10A0A0B4J240 114 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 SRRM4A7MD48 611 aaKnown RBP8.75□□□□□ -1.01
LSM2-209ENST00000470083 G3V2T6 193 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 M0R1X1 148 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 SHOXO15266 292 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 CRTAPO75718 401 aaPredicted RBP8.75□□□□□ -1.01
LSM2-209ENST00000470083 IGFBP3P17936 291 aaPredicted RBP8.75□□□□□ -1.01
LSM2-209ENST00000470083 GALP22466 123 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 CEACAM6P40199 344 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 ZNF585BQ52M93 769 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 SOHLH1Q5JUK2 328 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 AWAT2Q6E213 333 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 ZNF880Q6PDB4 577 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 CLEC19AQ6UXS0 136 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 UNQ9165/PRO28630Q6UXU0 137 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 SPATA24Q86W54 205 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 TEX45Q8NA69 505 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 SETD9Q8NE22 299 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 OR5B3Q8NH48 314 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 OR4A5Q8NH83 315 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 CD300LFQ8TDQ1 290 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 TRUB1Q8WWH5 349 aaKnown RBP8.75□□□□□ -1.01
LSM2-209ENST00000470083 GABARAPL3Q9BY60 117 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 GABARAPL1Q9H0R8 117 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 SCRT2Q9NQ03 307 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 IMPAD1Q9NX62 359 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 OR1A1Q9P1Q5 309 aa8.75□□□□□ -1.01
LSM2-209ENST00000470083 RPL36Q9Y3U8 105 aaKnown RBP8.75□□□□□ -1.01
LSM2-209ENST00000470083 TCRBV3S1A0A5B6 114 aa8.74□□□□□ -1.01
LSM2-209ENST00000470083 NAPSAO96009 420 aa8.74□□□□□ -1.01
LSM2-209ENST00000470083 IGHV3-23P01764 117 aa8.74□□□□□ -1.01
LSM2-209ENST00000470083 AMBPP02760 352 aa8.74□□□□□ -1.01
LSM2-209ENST00000470083 ZBTB25P24278 435 aa8.74□□□□□ -1.01
LSM2-209ENST00000470083 Q6ZR54 194 aa8.74□□□□□ -1.01
LSM2-209ENST00000470083 MOB1BQ7L9L4 216 aa8.74□□□□□ -1.01
LSM2-209ENST00000470083 SLC25A42Q86VD7 318 aa8.74□□□□□ -1.01
LSM2-209ENST00000470083 JAGN1Q8N5M9 183 aa8.74□□□□□ -1.01
LSM2-209ENST00000470083 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.74□□□□□ -1.01
LSM2-209ENST00000470083 ACOT12Q8WYK0 555 aa8.74□□□□□ -1.01
LSM2-209ENST00000470083 ORAI1Q96D31 301 aa8.74□□□□□ -1.01
LSM2-209ENST00000470083 LGALS12Q96DT0 336 aa8.74□□□□□ -1.01
LSM2-209ENST00000470083 ZNF257Q9Y2Q1 563 aa8.74□□□□□ -1.01
LSM2-209ENST00000470083 OR4C46A6NHA9 309 aa8.73□□□□□ -1.01
LSM2-209ENST00000470083 DCTN3O75935 186 aa8.73□□□□□ -1.01
LSM2-209ENST00000470083 MYOD1P15172 320 aa8.73□□□□□ -1.01
LSM2-209ENST00000470083 HLA-DMBP28068 263 aa8.73□□□□□ -1.01
LSM2-209ENST00000470083 GTF2A1P52655 376 aaPredicted RBP8.73□□□□□ -1.01
LSM2-209ENST00000470083 ELLP55199 621 aaPredicted RBP8.73□□□□□ -1.01
LSM2-209ENST00000470083 UBE2KP61086 200 aa8.73□□□□□ -1.01
LSM2-209ENST00000470083 SNRPGP62308 76 aaKnown RBP8.73□□□□□ -1.01
LSM2-209ENST00000470083 CBX3Q13185 183 aa8.73□□□□□ -1.01
LSM2-209ENST00000470083 MED21Q13503 144 aa8.73□□□□□ -1.01
LSM2-209ENST00000470083 VMA21Q3ZAQ7 101 aa8.73□□□□□ -1.01
LSM2-209ENST00000470083 MEDAGQ5VYS4 303 aa8.73□□□□□ -1.01
LSM2-209ENST00000470083 IDO2Q6ZQW0 420 aa8.73□□□□□ -1.01
LSM2-209ENST00000470083 Q6ZTC4 211 aa8.73□□□□□ -1.01
LSM2-209ENST00000470083 ZDHHC13Q8IUH4 622 aa8.73□□□□□ -1.01
LSM2-209ENST00000470083 NEDD4LQ96PU5 975 aa8.73□□□□□ -1.01
LSM2-209ENST00000470083 ERVK13-1Q9NX77 482 aa8.73□□□□□ -1.01
LSM2-209ENST00000470083 CKLFQ9UBR5 152 aa8.73□□□□□ -1.01
LSM2-209ENST00000470083 UFC1Q9Y3C8 167 aa8.73□□□□□ -1.01
LSM2-209ENST00000470083 TRAV8-7A0A075B6U6 113 aa8.72□□□□□ -1.01
LSM2-209ENST00000470083 SNTNA6NMZ2 147 aa8.72□□□□□ -1.01
LSM2-209ENST00000470083 DYNC1I1O14576 645 aa8.72□□□□□ -1.01
LSM2-209ENST00000470083 ACTL6BO94805 426 aa8.72□□□□□ -1.01
LSM2-209ENST00000470083 TAGLNQ01995 201 aaKnown RBP8.72□□□□□ -1.01
LSM2-209ENST00000470083 FLOT2Q14254 428 aa8.72□□□□□ -1.01
LSM2-209ENST00000470083 RTL8BQ17RB0 113 aa8.72□□□□□ -1.01
LSM2-209ENST00000470083 LAMTOR1Q6IAA8 161 aa8.72□□□□□ -1.01
LSM2-209ENST00000470083 APRG1Q8IVJ8 170 aa8.72□□□□□ -1.01
LSM2-209ENST00000470083 Q8NAQ8 132 aa8.72□□□□□ -1.01
LSM2-209ENST00000470083 EEF1AKMT3Q96AZ1 226 aa8.72□□□□□ -1.01
LSM2-209ENST00000470083 FAAP24Q9BTP7 215 aa8.72□□□□□ -1.01
LSM2-209ENST00000470083 CHMP1AQ9HD42 196 aaPredicted RBP8.72□□□□□ -1.01
LSM2-209ENST00000470083 ARGLU1Q9NWB6 273 aaPredicted RBP8.72□□□□□ -1.01
LSM2-209ENST00000470083 ARL2BPQ9Y2Y0 163 aa8.72□□□□□ -1.01
LSM2-209ENST00000470083 S4R3C0 116 aa8.72□□□□□ -1.01
LSM2-209ENST00000470083 MYCBP2O75592 4640 aa8.71□□□□□ -1.01
LSM2-209ENST00000470083 NPIPB5A8MRT5 1133 aa8.71□□□□□ -1.02
LSM2-209ENST00000470083 CREBL2O60519 120 aaPredicted RBP8.71□□□□□ -1.02
LSM2-209ENST00000470083 GSTT2P0CG29 244 aa8.71□□□□□ -1.02
LSM2-209ENST00000470083 GSTT2BP0CG30 244 aa8.71□□□□□ -1.02
LSM2-209ENST00000470083 PSMB6P28072 239 aa8.71□□□□□ -1.02
LSM2-209ENST00000470083 HLA-DRB3P79483 266 aa8.71□□□□□ -1.02
LSM2-209ENST00000470083 TMEM187Q14656 261 aa8.71□□□□□ -1.02
LSM2-209ENST00000470083 ATP6AP1Q15904 470 aa8.71□□□□□ -1.02
LSM2-209ENST00000470083 CCDC58Q4VC31 144 aa8.71□□□□□ -1.02
LSM2-209ENST00000470083 C10orf55Q5SWW7 151 aa8.71□□□□□ -1.02
LSM2-209ENST00000470083 XAF1Q6GPH4 301 aa8.71□□□□□ -1.02
LSM2-209ENST00000470083 RPL22L1Q6P5R6 122 aaKnown RBP8.71□□□□□ -1.02
LSM2-209ENST00000470083 C19orf35Q6ZS72 473 aa8.71□□□□□ -1.02
LSM2-209ENST00000470083 C6orf201Q7Z4U5 140 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms