RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 OR6C3Q9NZP0 311 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 AQP7O14520 342 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 ST8SIA5O15466 376 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 TIMM8AO60220 97 aaPredicted RBP11.35□□□□□ -0.59
BRCA1-209ENST00000470026 PAGE4O60829 102 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 GGCTO75223 188 aaKnown RBP11.35□□□□□ -0.59
BRCA1-209ENST00000470026 HRASP01112 189 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 OR9G9P0C7N8 305 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 NPPCP23582 126 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 GALR1P47211 349 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 LINC00205P59089 165 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 ZNF718Q3SXZ3 478 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 C4orf17Q53FE4 359 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 IGFL2Q6UWQ7 119 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 C1orf174Q8IYL3 243 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 OR4F5Q8NH21 305 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 RNASEH2CQ8TDP1 164 aaKnown RBP11.35□□□□□ -0.59
BRCA1-209ENST00000470026 R3HDM4Q96D70 268 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 OR4F4Q96R69 305 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 QTRT1Q9BXR0 403 aaKnown RBP11.35□□□□□ -0.59
BRCA1-209ENST00000470026 PSG11Q9UQ72 335 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 DIDO1Q9BTC0 2240 aaKnown RBP11.35□□□□□ -0.59
BRCA1-209ENST00000470026 IGHV3-43A0A0B4J1X8 118 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 RBFOX2O43251 390 aaKnown RBP eCLIP11.35□□□□□ -0.59
BRCA1-209ENST00000470026 SPINT2O43291 252 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 IGHV3-43DP0DP04 118 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 FABP4P15090 132 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 CDC34P49427 236 aaPredicted RBP11.35□□□□□ -0.59
BRCA1-209ENST00000470026 HNF4GQ14541 408 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 PDZD11Q5EBL8 140 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 VWA1Q6PCB0 445 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 TPRX1Q8N7U7 411 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 C9orf106Q8NAJ2 232 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 OR52E5Q8NH55 327 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 SNX22Q96L94 193 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 PFDN5Q99471 154 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 WASF3Q9UPY6 502 aa11.35□□□□□ -0.59
BRCA1-209ENST00000470026 PRSS46E5RG02 174 aa11.34□□□□□ -0.59
BRCA1-209ENST00000470026 TMPRSS2O15393 492 aa11.34□□□□□ -0.59
BRCA1-209ENST00000470026 MPDU1O75352 247 aa11.34□□□□□ -0.59
BRCA1-209ENST00000470026 HPRT1P00492 218 aa11.34□□□□□ -0.59
BRCA1-209ENST00000470026 GYPAP02724 150 aa11.34□□□□□ -0.59
BRCA1-209ENST00000470026 HOXC12P31275 282 aa11.34□□□□□ -0.59
BRCA1-209ENST00000470026 CFHR2P36980 270 aa11.34□□□□□ -0.59
BRCA1-209ENST00000470026 PDLIM4P50479 330 aa11.34□□□□□ -0.59
BRCA1-209ENST00000470026 TMPRSS3P57727 454 aa11.34□□□□□ -0.59
BRCA1-209ENST00000470026 FAM3BP58499 235 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-209ENST00000470026 PACRGQ96M98 296 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-209ENST00000470026 OR5B12Q96R08 314 aa11.34□□□□□ -0.59
BRCA1-209ENST00000470026 PLSCR4Q9NRQ2 329 aa11.34□□□□□ -0.59
BRCA1-209ENST00000470026 UFSP2Q9NUQ7 469 aa11.34□□□□□ -0.59
BRCA1-209ENST00000470026 JPT1Q9UK76 154 aa11.34□□□□□ -0.59
BRCA1-209ENST00000470026 CACNA1GO43497 2377 aa11.34□□□□□ -0.59
BRCA1-209ENST00000470026 GPR179Q6PRD1 2367 aa11.33□□□□□ -0.59
BRCA1-209ENST00000470026 IGHV2OR16-5A0A0B4J2B6 119 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 YPEL1O60688 119 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 CD1BP29016 333 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 PRDX2P32119 198 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 SRP14P37108 136 aaKnown RBP11.33□□□□□ -0.6
BRCA1-209ENST00000470026 VDAC2P45880 294 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-209ENST00000470026 SPCS3P61009 180 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 MORN2Q502X0 79 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 FAM169BQ8N8A8 192 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 OR5R1Q8NH85 324 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 RFESDQ8TAC1 157 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 Q8TCH9 128 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 TMEM170AQ8WVE7 144 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 YPEL2Q96QA6 119 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 DCTN5Q9BTE1 182 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 MSL2Q9HCI7 577 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 GFOD1Q9NXC2 390 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 DOCK11Q5JSL3 2073 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 PRR33A8MZF0 331 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 SRRM5B3KS81 715 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 CD99P14209 185 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 PAX1P15863 534 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 CD82P27701 267 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 RPS16P62249 146 aaKnown RBP11.33□□□□□ -0.6
BRCA1-209ENST00000470026 MZT1Q08AG7 82 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 SPINK9Q5DT21 86 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 C9orf152Q5JTZ5 239 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 DEFB123Q8N688 67 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 CNEP1R1Q8N9A8 125 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 OR1P1Q8NH06 330 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 LRRC29Q8WV35 223 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 ELOVL1Q9BW60 279 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 CACNA1DQ01668 2161 aa11.33□□□□□ -0.6
BRCA1-209ENST00000470026 IGHV1-18A0A0C4DH31 117 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 DEFB108AA8MXU0 73 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 C11orf94C9JXX5 98 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 PPP5D1E7EU14 171 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 M0R296 226 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 F2RL2O00254 374 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 DVL1O14640 695 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 PDE6DO43924 150 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 EGR1P18146 543 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 OPRK1P41145 380 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 GPR12P47775 334 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 FABP6P51161 128 aa11.32□□□□□ -0.6
BRCA1-209ENST00000470026 TLE1Q04724 770 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms