RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 CMTM5Q96DZ9 223 aa1.51□□□□□ -2.17
VPS8-220ENST00000469713 SFRP2Q96HF1 295 aa1.51□□□□□ -2.17
VPS8-220ENST00000469713 PAIP2Q9BPZ3 127 aaKnown RBP1.51□□□□□ -2.17
VPS8-220ENST00000469713 PRO2289Q9P1D8 64 aa1.51□□□□□ -2.17
VPS8-220ENST00000469713 FAM215AQ9Y5M1 114 aa1.51□□□□□ -2.17
VPS8-220ENST00000469713 MYO3BQ8WXR4 1341 aa1.5□□□□□ -2.17
VPS8-220ENST00000469713 A0A0A6YYH2 397 aa1.5□□□□□ -2.17
VPS8-220ENST00000469713 A0A1W2PQD3 144 aa1.5□□□□□ -2.17
VPS8-220ENST00000469713 C5orf49A4QMS7 147 aa1.5□□□□□ -2.17
VPS8-220ENST00000469713 OR6C6A6NF89 314 aa1.5□□□□□ -2.17
VPS8-220ENST00000469713 A6NJ64 397 aa1.5□□□□□ -2.17
VPS8-220ENST00000469713 NDUFB2O95178 105 aa1.5□□□□□ -2.17
VPS8-220ENST00000469713 HLA-DQB2P05538 268 aa1.5□□□□□ -2.17
VPS8-220ENST00000469713 UBE2IP63279 158 aaKnown RBP1.5□□□□□ -2.17
VPS8-220ENST00000469713 MED21Q13503 144 aa1.5□□□□□ -2.17
VPS8-220ENST00000469713 LGALS9BQ3B8N2 356 aa1.5□□□□□ -2.17
VPS8-220ENST00000469713 SAPCD1Q5SSQ6 148 aa1.5□□□□□ -2.17
VPS8-220ENST00000469713 FAM151BQ6UXP7 276 aa1.5□□□□□ -2.17
VPS8-220ENST00000469713 EEF1AKMT1Q8WVE0 214 aa1.5□□□□□ -2.17
VPS8-220ENST00000469713 HES4Q9HCC6 221 aa1.5□□□□□ -2.17
VPS8-220ENST00000469713 NKIRAS1Q9NYS0 192 aa1.5□□□□□ -2.17
VPS8-220ENST00000469713 POLR3HQ9Y535 204 aaPredicted RBP1.5□□□□□ -2.17
VPS8-220ENST00000469713 SCN9AQ15858 1988 aa1.5□□□□□ -2.17
VPS8-220ENST00000469713 RTEL1-TNFRSF6BF6WH68 1400 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 HMCN1Q96RW7 5635 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 IGLV3-9A0A075B6K5 115 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 ARRDC5A6NEK1 342 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 ZNF860A6NHJ4 632 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 C2orf74A8MZ97 194 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 J3QQQ9 107 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 HLA-DRAP01903 254 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 S100A6P06703 90 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 GABRA2P47869 451 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 CTBP2P56545 445 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 RBM11P57052 281 aaKnown RBP1.49□□□□□ -2.17
VPS8-220ENST00000469713 RPL26P61254 145 aaKnown RBP1.49□□□□□ -2.17
VPS8-220ENST00000469713 CTAG1AP78358 180 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 HOXC5Q00444 222 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 GNA12Q03113 381 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 PRDX4Q13162 271 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 PPP1R1AQ13522 171 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 ZNF565Q8N9K5 539 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 ITFG2Q969R8 447 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 C12orf43Q96C57 262 aaKnown RBP1.49□□□□□ -2.17
VPS8-220ENST00000469713 ANKRD36BP1Q96IX9 119 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 C8orf76Q96K31 380 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 NMNAT3Q96T66 252 aa1.49□□□□□ -2.17
VPS8-220ENST00000469713 RPL26L1Q9UNX3 145 aaKnown RBP1.49□□□□□ -2.17
VPS8-220ENST00000469713 KLK5Q9Y337 293 aaPredicted RBP1.49□□□□□ -2.17
VPS8-220ENST00000469713 AMMECR1Q9Y4X0 333 aaPredicted RBP1.49□□□□□ -2.17
VPS8-220ENST00000469713 NYNRINQ9P2P1 1898 aaKnown RBP1.49□□□□□ -2.17
VPS8-220ENST00000469713 MAP3K5Q99683 1374 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 DOCK10Q96BY6 2186 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 A0A087WUU8 490 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 TXNDC9O14530 226 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 TYMSP04818 313 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 BPGMP07738 259 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 COX5BP10606 129 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 CD24P25063 80 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 RPL27AP46776 148 aaKnown RBP1.48□□□□□ -2.17
VPS8-220ENST00000469713 CDC34P49427 236 aaPredicted RBP1.48□□□□□ -2.17
VPS8-220ENST00000469713 BLVRAP53004 296 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 ZNF90Q03938 601 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 ITGB3BPQ13352 177 aaPredicted RBP1.48□□□□□ -2.17
VPS8-220ENST00000469713 SLC36A2Q495M3 483 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 N4BP2L1Q5TBK1 243 aaPredicted RBP1.48□□□□□ -2.17
VPS8-220ENST00000469713 CST9Q5W186 159 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 Q6ZS52 159 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 LHFPL1Q86WI0 220 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 Q8N402 240 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 SMCR5Q8TEV8 140 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 ZNF625Q96I27 306 aaPredicted RBP1.48□□□□□ -2.17
VPS8-220ENST00000469713 TIMM21Q9BVV7 248 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 PARD6GQ9BYG4 376 aaPredicted RBP1.48□□□□□ -2.17
VPS8-220ENST00000469713 DRC3Q9H069 523 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 BABAM2Q9NXR7 383 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 NAV1Q8NEY1 1877 aa1.48□□□□□ -2.17
VPS8-220ENST00000469713 TRGV5A0A0B4J1U4 118 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 A0A1B0GVG6 124 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 RFPL4AA6NLU0 287 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 RFPL4AL1F8VTS6 287 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 PFDN6O15212 129 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 SSNA1O43805 119 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 NPYP01303 97 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 REG1AP05451 166 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 MAGEA2P43356 314 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 TBPL1P62380 186 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 MLLT11Q13015 90 aaPredicted RBP1.47□□□□□ -2.17
VPS8-220ENST00000469713 PLPPR5Q32ZL2 321 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 PABPC1L2AQ5JQF8 200 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 PTRHD1Q6GMV3 140 aaKnown RBP1.47□□□□□ -2.17
VPS8-220ENST00000469713 TNFAIP8L2Q6P589 184 aaPredicted RBP1.47□□□□□ -2.17
VPS8-220ENST00000469713 SLC35E3Q7Z769 313 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 GPHB5Q86YW7 130 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 OR5J2Q8NH18 312 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 RAB2BQ8WUD1 216 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 TTTY13Q9BZ97 58 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 TMEM222Q9H0R3 208 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 MAP1LC3AQ9H492 121 aa1.47□□□□□ -2.17
VPS8-220ENST00000469713 TAAR3PQ9P1P4 343 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms