RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 NKX6-1P78426 367 aaPredicted RBP12.18□□□□□ -0.46
CBWD3-205ENST00000469687 ELOBQ15370 118 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 IGFL3Q6UXB1 125 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 Q6ZS92 163 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 RBMXL3Q8N7X1 1067 aaKnown RBP12.18□□□□□ -0.46
CBWD3-205ENST00000469687 MALSU1Q96EH3 234 aa12.18□□□□□ -0.46
CBWD3-205ENST00000469687 PCNX1Q96RV3 2341 aa12.17□□□□□ -0.46
CBWD3-205ENST00000469687 UBE2CO00762 179 aa12.17□□□□□ -0.46
CBWD3-205ENST00000469687 CRYAAP02489 173 aa12.17□□□□□ -0.46
CBWD3-205ENST00000469687 FGF7P21781 194 aa12.17□□□□□ -0.46
CBWD3-205ENST00000469687 MEOX2P50222 304 aa12.17□□□□□ -0.46
CBWD3-205ENST00000469687 KLF3P57682 345 aaPredicted RBP12.17□□□□□ -0.46
CBWD3-205ENST00000469687 FAM27E3Q08E93 113 aa12.17□□□□□ -0.46
CBWD3-205ENST00000469687 FABP9Q0Z7S8 132 aa12.17□□□□□ -0.46
CBWD3-205ENST00000469687 TCF15Q12870 199 aa12.17□□□□□ -0.46
CBWD3-205ENST00000469687 SLC35E3Q7Z769 313 aa12.17□□□□□ -0.46
CBWD3-205ENST00000469687 OR10P1Q8NGE3 313 aa12.17□□□□□ -0.46
CBWD3-205ENST00000469687 PINX1Q96BK5 328 aaKnown RBP12.17□□□□□ -0.46
CBWD3-205ENST00000469687 SNX22Q96L94 193 aa12.17□□□□□ -0.46
CBWD3-205ENST00000469687 TMEM147Q9BVK8 224 aa12.17□□□□□ -0.46
CBWD3-205ENST00000469687 ROS1P08922 2347 aa12.17□□□□□ -0.46
CBWD3-205ENST00000469687 TGIF2-C20orf24A0A0A6YYL0 155 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 M0R1X1 148 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 MGST3O14880 152 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 NQO2P16083 231 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 GLRXP35754 106 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 RPS10P46783 165 aaKnown RBP12.16□□□□□ -0.46
CBWD3-205ENST00000469687 MZT1Q08AG7 82 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 C1orf185Q5T7R7 199 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 C1orf174Q8IYL3 243 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 OR10G4Q8NGN3 311 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 GATAD1Q8WUU5 269 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 LHX4Q969G2 390 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 IFI27L2Q9H2X8 130 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 ACACAQ13085 2346 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 A0A087WWC5 75 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 LHBP01229 141 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 IGHV2-5P01817 119 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 CFHR2P36980 270 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 TRAT1Q6PIZ9 186 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 CENPVQ7Z7K6 275 aaPredicted RBP12.16□□□□□ -0.46
CBWD3-205ENST00000469687 TGIF2LYQ8IUE0 185 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 EDARADDQ8WWZ3 215 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 NPCDR1Q9BY65 106 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 MRPL37Q9BZE1 423 aaKnown RBP12.16□□□□□ -0.46
CBWD3-205ENST00000469687 SLC39A9Q9NUM3 307 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 JPT1Q9UK76 154 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 TIMM9Q9Y5J7 89 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 KALRNO60229 2985 aa12.16□□□□□ -0.46
CBWD3-205ENST00000469687 DYSFO75923 2080 aa12.15□□□□□ -0.46
CBWD3-205ENST00000469687 TRAV3A0A0B4J244 114 aa12.15□□□□□ -0.46
CBWD3-205ENST00000469687 C15orf62A8K5M9 175 aa12.15□□□□□ -0.46
CBWD3-205ENST00000469687 GZMHP20718 246 aa12.15□□□□□ -0.46
CBWD3-205ENST00000469687 TCTEX1D1Q8N7M0 179 aa12.15□□□□□ -0.46
CBWD3-205ENST00000469687 VAX2Q9UIW0 290 aa12.15□□□□□ -0.46
CBWD3-205ENST00000469687 LAMP3Q9UQV4 416 aa12.15□□□□□ -0.46
CBWD3-205ENST00000469687 PIEZO2Q9H5I5 2752 aa12.15□□□□□ -0.46
CBWD3-205ENST00000469687 IFNA17P01571 189 aa12.15□□□□□ -0.47
CBWD3-205ENST00000469687 CD81P60033 236 aa12.15□□□□□ -0.47
CBWD3-205ENST00000469687 CR1LQ2VPA4 569 aa12.15□□□□□ -0.47
CBWD3-205ENST00000469687 FFAR4Q5NUL3 377 aa12.15□□□□□ -0.47
CBWD3-205ENST00000469687 MRGPRGQ86SM5 289 aa12.15□□□□□ -0.47
CBWD3-205ENST00000469687 CALYQ9NYX4 217 aa12.15□□□□□ -0.47
CBWD3-205ENST00000469687 IGLV3-9A0A075B6K5 115 aa12.14□□□□□ -0.47
CBWD3-205ENST00000469687 F2RL2O00254 374 aa12.14□□□□□ -0.47
CBWD3-205ENST00000469687 KLK10O43240 276 aa12.14□□□□□ -0.47
CBWD3-205ENST00000469687 YPEL1O60688 119 aa12.14□□□□□ -0.47
CBWD3-205ENST00000469687 CYB5R3P00387 301 aaPredicted RBP12.14□□□□□ -0.47
CBWD3-205ENST00000469687 BMP5P22003 454 aa12.14□□□□□ -0.47
CBWD3-205ENST00000469687 ATP6V1FQ16864 119 aa12.14□□□□□ -0.47
CBWD3-205ENST00000469687 C17orf58Q2M2W7 97 aa12.14□□□□□ -0.47
CBWD3-205ENST00000469687 Q8N7P7 452 aa12.14□□□□□ -0.47
CBWD3-205ENST00000469687 DEFB108BQ8NET1 73 aa12.14□□□□□ -0.47
CBWD3-205ENST00000469687 OR10G9Q8NGN4 311 aa12.14□□□□□ -0.47
CBWD3-205ENST00000469687 OR10G7Q8NGN6 311 aa12.14□□□□□ -0.47
CBWD3-205ENST00000469687 CIB3Q96Q77 187 aaPredicted RBP12.14□□□□□ -0.47
CBWD3-205ENST00000469687 YPEL2Q96QA6 119 aa12.14□□□□□ -0.47
CBWD3-205ENST00000469687 SSX3Q99909 188 aa12.14□□□□□ -0.47
CBWD3-205ENST00000469687 OR6C3Q9NZP0 311 aa12.14□□□□□ -0.47
CBWD3-205ENST00000469687 EIF2S3P41091 472 aaKnown RBP12.13□□□□□ -0.47
CBWD3-205ENST00000469687 PRAMEF5Q5TYX0 476 aa12.13□□□□□ -0.47
CBWD3-205ENST00000469687 SLC16A13Q7RTY0 426 aa12.13□□□□□ -0.47
CBWD3-205ENST00000469687 DCAF16Q9NXF7 216 aa12.13□□□□□ -0.47
CBWD3-205ENST00000469687 METTL1Q9UBP6 276 aaKnown RBP12.13□□□□□ -0.47
CBWD3-205ENST00000469687 HPRT1P00492 218 aa12.13□□□□□ -0.47
CBWD3-205ENST00000469687 TIMP3P35625 211 aa12.13□□□□□ -0.47
CBWD3-205ENST00000469687 RTP5Q14D33 572 aa12.13□□□□□ -0.47
CBWD3-205ENST00000469687 VWC2Q2TAL6 325 aa12.13□□□□□ -0.47
CBWD3-205ENST00000469687 GCSAMLQ5JQS6 135 aa12.13□□□□□ -0.47
CBWD3-205ENST00000469687 WDR25Q64LD2 544 aaPredicted RBP12.13□□□□□ -0.47
CBWD3-205ENST00000469687 C1QL4Q86Z23 238 aa12.13□□□□□ -0.47
CBWD3-205ENST00000469687 PPP1R35Q8TAP8 253 aa12.13□□□□□ -0.47
CBWD3-205ENST00000469687 SDF2L1Q9HCN8 221 aa12.13□□□□□ -0.47
CBWD3-205ENST00000469687 GCM1Q9NP62 436 aa12.13□□□□□ -0.47
CBWD3-205ENST00000469687 CGB3P0DN86 165 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 CGB7P0DN87 165 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 MDKP21741 143 aaPredicted RBP12.12□□□□□ -0.47
CBWD3-205ENST00000469687 CCKARP32238 428 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 GNB2P62879 340 aa12.12□□□□□ -0.47
CBWD3-205ENST00000469687 NCMAPQ5T1S8 102 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms