RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.47■□□□□ 0.07
SMC4-209ENST00000468653 SLC35D1Q9NTN3 355 aa15.47■□□□□ 0.07
SMC4-209ENST00000468653 M0R1W7 72 aa15.46■□□□□ 0.07
SMC4-209ENST00000468653 GPR137BO60478 399 aa15.46■□□□□ 0.07
SMC4-209ENST00000468653 SPDEFO95238 335 aa15.46■□□□□ 0.07
SMC4-209ENST00000468653 MMP9P14780 707 aa15.46■□□□□ 0.07
SMC4-209ENST00000468653 COX7A1P24310 79 aa15.46■□□□□ 0.07
SMC4-209ENST00000468653 REG1BP48304 166 aa15.46■□□□□ 0.07
SMC4-209ENST00000468653 UBA52P62987 128 aaKnown RBP15.46■□□□□ 0.07
SMC4-209ENST00000468653 EXOSC2Q13868 293 aaKnown RBP15.46■□□□□ 0.07
SMC4-209ENST00000468653 GPR157Q5UAW9 335 aa15.46■□□□□ 0.07
SMC4-209ENST00000468653 SSX9Q7RTT3 188 aa15.46■□□□□ 0.07
SMC4-209ENST00000468653 ZNF295-AS1Q8N0V1 137 aa15.46■□□□□ 0.07
SMC4-209ENST00000468653 PIMREGQ9BSJ6 248 aa15.46■□□□□ 0.07
SMC4-209ENST00000468653 C11orf1Q9H5F2 150 aa15.46■□□□□ 0.07
SMC4-209ENST00000468653 KIAA1324LA8MWY0 1029 aaPredicted RBP15.45■□□□□ 0.06
SMC4-209ENST00000468653 J3QKU1 62 aa15.45■□□□□ 0.06
SMC4-209ENST00000468653 RBMXL2O75526 392 aaKnown RBP15.45■□□□□ 0.06
SMC4-209ENST00000468653 APOA2P02652 100 aa15.45■□□□□ 0.06
SMC4-209ENST00000468653 PLA2G2AP14555 144 aa15.45■□□□□ 0.06
SMC4-209ENST00000468653 ZFP36P26651 326 aaKnown RBP15.45■□□□□ 0.06
SMC4-209ENST00000468653 CAV2P51636 162 aa15.45■□□□□ 0.06
SMC4-209ENST00000468653 PRB3Q04118 309 aaPredicted RBP15.45■□□□□ 0.06
SMC4-209ENST00000468653 MIDNQ504T8 468 aa15.45■□□□□ 0.06
SMC4-209ENST00000468653 UBQLN2Q9UHD9 624 aa15.45■□□□□ 0.06
SMC4-209ENST00000468653 FAM90A26D6RGX4 464 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 ENSAO43768 121 aaKnown RBP15.44■□□□□ 0.06
SMC4-209ENST00000468653 ZNF137PP52743 207 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 LMO4P61968 165 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 LCN2P80188 198 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 TAGLNQ01995 201 aaKnown RBP15.44■□□□□ 0.06
SMC4-209ENST00000468653 CLEC2AQ6UVW9 174 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 OR2C3Q8N628 320 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 Q8N7P7 452 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 OR13D1Q8NGV5 346 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 NRGNQ92686 78 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 ST6GALNAC6Q969X2 333 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 RAB40CQ96S21 281 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 CHD6Q8TD26 2715 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 TAAR5O14804 337 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 SYNGR2O43760 224 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 RRASP10301 218 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 HLA-DRB5Q30154 266 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 DHRS7BQ6IAN0 325 aaPredicted RBP15.44■□□□□ 0.06
SMC4-209ENST00000468653 TGIF2LXQ8IUE1 241 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 VKORC1L1Q8N0U8 176 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 PNKDQ8N490 385 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 ST8SIA2Q92186 375 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 PERPQ96FX8 193 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 SIRT7Q9NRC8 400 aa15.44■□□□□ 0.06
SMC4-209ENST00000468653 FAM24AA6NFZ4 105 aa15.43■□□□□ 0.06
SMC4-209ENST00000468653 FAM90A9PA6NNJ1 464 aa15.43■□□□□ 0.06
SMC4-209ENST00000468653 H7C2Y5 167 aa15.43■□□□□ 0.06
SMC4-209ENST00000468653 NDUFS8O00217 210 aa15.43■□□□□ 0.06
SMC4-209ENST00000468653 HRASP01112 189 aa15.43■□□□□ 0.06
SMC4-209ENST00000468653 IGLV1-47P01700 117 aa15.43■□□□□ 0.06
SMC4-209ENST00000468653 COL8A1P27658 744 aa15.43■□□□□ 0.06
SMC4-209ENST00000468653 RPL23AP62750 156 aaKnown RBP15.43■□□□□ 0.06
SMC4-209ENST00000468653 DIAPH2-AS1Q14236 149 aa15.43■□□□□ 0.06
SMC4-209ENST00000468653 BEND2Q8NDZ0 799 aa15.43■□□□□ 0.06
SMC4-209ENST00000468653 SLC25A31Q9H0C2 315 aa15.43■□□□□ 0.06
SMC4-209ENST00000468653 LYRM2Q9NU23 88 aaPredicted RBP15.43■□□□□ 0.06
SMC4-209ENST00000468653 H0YJW9 148 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 MED6O75586 246 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 TMEM50AO95807 157 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 OR9G9P0C7N8 305 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 IAPPP10997 89 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 HTR2BP41595 481 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 TNFRSF9Q07011 255 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 CLEC9AQ6UXN8 241 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 OR8H3Q8N146 312 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 KIR3DL3Q8N743 410 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 OR5AN1Q8NGI8 311 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 OR4A16Q8NH70 328 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 C10orf105Q8TEF2 133 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 RHOVQ96L33 236 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 NABP2Q9BQ15 211 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 TMEM140Q9NV12 185 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 HSPB7Q9UBY9 170 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 FBXL17Q9UF56 701 aa15.42■□□□□ 0.06
SMC4-209ENST00000468653 AMMECR1Q9Y4X0 333 aaPredicted RBP15.42■□□□□ 0.06
SMC4-209ENST00000468653 BUB1B-PAK6H3BSN5 160 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 PRTN3P24158 256 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 ARHGDIBP52566 201 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 UBE2KP61086 200 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 ZNF787Q6DD87 383 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 ALKAL2Q6UX46 152 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 C1orf122Q6ZSJ8 110 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 SMIM3Q9BZL3 60 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 CYTL1Q9NRR1 136 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 ARHGAP32A7KAX9 2087 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 A8MXK9 166 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 IGKV1-16P04430 117 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 PAX9P55771 341 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 EWSR1Q01844 656 aaKnown RBP eCLIP15.41■□□□□ 0.06
SMC4-209ENST00000468653 NHLH2Q02577 135 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 NDUFA5Q16718 116 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 TMEM252Q8N6L7 170 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 AIFM2Q9BRQ8 373 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 PCGF1Q9BSM1 259 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms