RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 TRIM77I1YAP6 450 aa12.17□□□□□ -0.46
SNIP1-202ENST00000468040 B3GALNT1O75752 331 aa12.17□□□□□ -0.46
SNIP1-202ENST00000468040 OR2F2O95006 317 aa12.17□□□□□ -0.46
SNIP1-202ENST00000468040 IGKV1-16P04430 117 aa12.17□□□□□ -0.46
SNIP1-202ENST00000468040 RPL15P61313 204 aaKnown RBP12.17□□□□□ -0.46
SNIP1-202ENST00000468040 UBA52P62987 128 aaKnown RBP12.17□□□□□ -0.46
SNIP1-202ENST00000468040 HNF4GQ14541 408 aa12.17□□□□□ -0.46
SNIP1-202ENST00000468040 OR2B11Q5JQS5 317 aa12.17□□□□□ -0.46
SNIP1-202ENST00000468040 CCBE1Q6UXH8 406 aaPredicted RBP12.17□□□□□ -0.46
SNIP1-202ENST00000468040 TMED4Q7Z7H5 227 aa12.17□□□□□ -0.46
SNIP1-202ENST00000468040 TMEM219Q86XT9 240 aa12.17□□□□□ -0.46
SNIP1-202ENST00000468040 SPAG16Q8N0X2 631 aa12.17□□□□□ -0.46
SNIP1-202ENST00000468040 Q8N6K4 173 aa12.17□□□□□ -0.46
SNIP1-202ENST00000468040 ENKURQ8TC29 256 aa12.17□□□□□ -0.46
SNIP1-202ENST00000468040 RBM14Q96PK6 669 aaKnown RBP12.17□□□□□ -0.46
SNIP1-202ENST00000468040 SLC25A33Q9BSK2 321 aa12.17□□□□□ -0.46
SNIP1-202ENST00000468040 FAM212BQ9NTI7 297 aaPredicted RBP12.17□□□□□ -0.46
SNIP1-202ENST00000468040 C1RLQ9NZP8 487 aa12.17□□□□□ -0.46
SNIP1-202ENST00000468040 TEX13DA0A0J9YY54 714 aaPredicted RBP12.16□□□□□ -0.46
SNIP1-202ENST00000468040 M0QZK8 103 aa12.16□□□□□ -0.46
SNIP1-202ENST00000468040 GPR137BO60478 399 aa12.16□□□□□ -0.46
SNIP1-202ENST00000468040 CRYZL1O95825 349 aa12.16□□□□□ -0.46
SNIP1-202ENST00000468040 TAS2R31P59538 309 aa12.16□□□□□ -0.46
SNIP1-202ENST00000468040 DCTN2Q13561 401 aaKnown RBP12.16□□□□□ -0.46
SNIP1-202ENST00000468040 TMEM177Q53S58 311 aa12.16□□□□□ -0.46
SNIP1-202ENST00000468040 C11orf88Q6PI97 169 aa12.16□□□□□ -0.46
SNIP1-202ENST00000468040 CENPSQ8N2Z9 138 aa12.16□□□□□ -0.46
SNIP1-202ENST00000468040 OSR1Q8TAX0 266 aaPredicted RBP12.16□□□□□ -0.46
SNIP1-202ENST00000468040 TSNAXQ99598 290 aaKnown RBP12.16□□□□□ -0.46
SNIP1-202ENST00000468040 MOB4Q9Y3A3 225 aa12.16□□□□□ -0.46
SNIP1-202ENST00000468040 C3orf85A0A1B0GTC6 90 aa12.15□□□□□ -0.46
SNIP1-202ENST00000468040 CRYM-AS1A6NIL9 109 aa12.15□□□□□ -0.46
SNIP1-202ENST00000468040 H0Y980 276 aa12.15□□□□□ -0.46
SNIP1-202ENST00000468040 SHOXO15266 292 aa12.15□□□□□ -0.46
SNIP1-202ENST00000468040 SPDEFO95238 335 aa12.15□□□□□ -0.46
SNIP1-202ENST00000468040 TCRBP04435 133 aa12.15□□□□□ -0.46
SNIP1-202ENST00000468040 LGALS7P47929 136 aa12.15□□□□□ -0.46
SNIP1-202ENST00000468040 RPS16P62249 146 aaKnown RBP12.15□□□□□ -0.46
SNIP1-202ENST00000468040 MMDQ15546 238 aa12.15□□□□□ -0.46
SNIP1-202ENST00000468040 SGPP2Q8IWX5 399 aa12.15□□□□□ -0.46
SNIP1-202ENST00000468040 HARBI1Q96MB7 349 aa12.15□□□□□ -0.46
SNIP1-202ENST00000468040 AIFM2Q9BRQ8 373 aa12.15□□□□□ -0.46
SNIP1-202ENST00000468040 NAA60Q9H7X0 242 aa12.15□□□□□ -0.46
SNIP1-202ENST00000468040 KIAA1456Q9P272 454 aa12.15□□□□□ -0.46
SNIP1-202ENST00000468040 NCBP2LA6PVI3 153 aaKnown RBP12.14□□□□□ -0.47
SNIP1-202ENST00000468040 NBR2O15453 112 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 FGF16O43320 207 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 CHST1O43916 411 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 RAMP3O60896 148 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 HPRT1P00492 218 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 SERPINE2P07093 398 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 AKR1C4P17516 323 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 BRWD1-AS2P59051 145 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 UBE2MP61081 183 aaKnown RBP12.14□□□□□ -0.47
SNIP1-202ENST00000468040 FBLN7Q53RD9 439 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 TMEM128Q5BJH2 165 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 ADAD2Q8NCV1 583 aaKnown RBP12.14□□□□□ -0.47
SNIP1-202ENST00000468040 NPBQ8NG41 125 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 ZFAND2BQ8WV99 257 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 TMEM230Q96A57 120 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 NPFFR1Q9GZQ6 430 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 C20orf85Q9H1P6 137 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 PLEKHA2Q9HB19 425 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 COMMD9Q9P000 198 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 KCNIP3Q9Y2W7 256 aa12.14□□□□□ -0.47
SNIP1-202ENST00000468040 ARPC1BO15143 372 aaKnown RBP12.13□□□□□ -0.47
SNIP1-202ENST00000468040 PEX14O75381 377 aa12.13□□□□□ -0.47
SNIP1-202ENST00000468040 HRASP01112 189 aa12.13□□□□□ -0.47
SNIP1-202ENST00000468040 CRYBA1P05813 215 aa12.13□□□□□ -0.47
SNIP1-202ENST00000468040 ANXA3P12429 323 aa12.13□□□□□ -0.47
SNIP1-202ENST00000468040 RPA2P15927 270 aa12.13□□□□□ -0.47
SNIP1-202ENST00000468040 NRARPQ7Z6K4 114 aa12.13□□□□□ -0.47
SNIP1-202ENST00000468040 SLC25A42Q86VD7 318 aa12.13□□□□□ -0.47
SNIP1-202ENST00000468040 RBMXL1Q96E39 390 aaKnown RBP12.13□□□□□ -0.47
SNIP1-202ENST00000468040 GALNT14Q96FL9 552 aa12.13□□□□□ -0.47
SNIP1-202ENST00000468040 RITA1Q96K30 269 aa12.13□□□□□ -0.47
SNIP1-202ENST00000468040 TP53RKQ96S44 253 aa12.13□□□□□ -0.47
SNIP1-202ENST00000468040 PLSCR3Q9NRY6 295 aa12.13□□□□□ -0.47
SNIP1-202ENST00000468040 NUDT15Q9NV35 164 aa12.13□□□□□ -0.47
SNIP1-202ENST00000468040 NUBP2Q9Y5Y2 271 aa12.13□□□□□ -0.47
SNIP1-202ENST00000468040 FAM181BA6NEQ2 426 aa12.12□□□□□ -0.47
SNIP1-202ENST00000468040 RRHO14718 337 aa12.12□□□□□ -0.47
SNIP1-202ENST00000468040 NDUFA3O95167 84 aa12.12□□□□□ -0.47
SNIP1-202ENST00000468040 PTTG1O95997 202 aa12.12□□□□□ -0.47
SNIP1-202ENST00000468040 OR5AC1P0C628 307 aa12.12□□□□□ -0.47
SNIP1-202ENST00000468040 VSIG10L2P0DP72 767 aa12.12□□□□□ -0.47
SNIP1-202ENST00000468040 UCP1P25874 307 aa12.12□□□□□ -0.47
SNIP1-202ENST00000468040 F2RL1P55085 397 aa12.12□□□□□ -0.47
SNIP1-202ENST00000468040 DHODHQ02127 395 aa12.12□□□□□ -0.47
SNIP1-202ENST00000468040 VMA21Q3ZAQ7 101 aa12.12□□□□□ -0.47
SNIP1-202ENST00000468040 ZNF585BQ52M93 769 aa12.12□□□□□ -0.47
SNIP1-202ENST00000468040 C5orf56Q8N8D9 126 aa12.12□□□□□ -0.47
SNIP1-202ENST00000468040 Q8N9W7 124 aa12.12□□□□□ -0.47
SNIP1-202ENST00000468040 DUSP18Q8NEJ0 188 aa12.12□□□□□ -0.47
SNIP1-202ENST00000468040 VSTM2AQ8TAG5 236 aa12.12□□□□□ -0.47
SNIP1-202ENST00000468040 RANBP3Q9H6Z4 567 aaPredicted RBP12.12□□□□□ -0.47
SNIP1-202ENST00000468040 FLVCR2Q9UPI3 526 aa12.12□□□□□ -0.47
SNIP1-202ENST00000468040 TRAV6A0A075B6T7 132 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 PIGBOS1A0A0B4J2F0 54 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 S1PR2O95136 353 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms