RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 OR2D3Q8NGH3 330 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 OR5C1Q8NGR4 320 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 FNDC9Q8TBE3 224 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 Q8WTZ3 238 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 TMBIM1Q969X1 311 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 TESCQ96BS2 214 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 AICDAQ9GZX7 198 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 FKBP14Q9NWM8 211 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 SNX12Q9UMY4 172 aa1.94□□□□□ -2.1
CDC42BPA-211ENST00000466538 CCDC144AA2RUR9 1427 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 EVPLLA8MZ36 301 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 C2orf74A8MZ97 194 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 PGRMC1O00264 195 aaKnown RBP1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 UBFD1O14562 309 aaKnown RBP1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 SSNA1O43805 119 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 DCTN3O75935 186 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 LY6HO94772 140 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 IL6P05231 212 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 RPSAP08865 295 aaKnown RBP1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 OR4E1P0C645 316 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 ESDP10768 282 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 ALOX5APP20292 161 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 OR10J1P30954 320 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 RAP1GDS1P52306 607 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 RWDD2BP57060 319 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 TMEM33P57088 247 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 TAS2R45P59539 299 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 HERVK_113P63121 156 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 TMEM267Q0VDI3 215 aaPredicted RBP1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 KRTAP6-3Q3LI67 103 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 TMEM42Q69YG0 159 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 RASL11AQ6T310 242 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 ALKAL1Q6UXT8 129 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 C1orf158Q8N1D5 194 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 LRRC25Q8N386 305 aaPredicted RBP1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 C16orf78Q8WTQ4 265 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 MS4A6EQ96DS6 147 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 CPNE2Q96FN4 548 aaPredicted RBP1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 MGLLQ99685 303 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 OR51I1Q9H343 314 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 HDGFL3Q9Y3E1 203 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 ANKRD30AQ9BXX3 1397 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 THSD7AQ9UPZ6 1657 aa1.93□□□□□ -2.1
CDC42BPA-211ENST00000466538 TGIF2-C20orf24A0A0A6YYL0 155 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 LOC105371267A0A1B0GV96 52 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 ODF3BA8MYP8 253 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 E5RI56 91 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 SLC17A3O00476 420 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 GSTZ1O43708 216 aaPredicted RBP1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 HAND1O96004 215 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 FABP1P07148 127 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 CYBAP13498 195 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 CXCL2P19875 107 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 CA7P43166 264 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 OR4D2P58180 307 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 TSPEAR-AS2P59090 65 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 MRPS25P82663 173 aaKnown RBP1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 FABP5Q01469 135 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 IFITM2Q01629 132 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 PPP1R1AQ13522 171 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 GUK1Q16774 197 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 AKIRIN2Q53H80 203 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 ZNF567Q8N184 647 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 EEF1AKMT1Q8WVE0 214 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 ASB17Q8WXJ9 295 aa1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 MRPS26Q9BYN8 205 aaKnown RBP1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 TXNL4BQ9NX01 149 aaKnown RBP1.92□□□□□ -2.1
CDC42BPA-211ENST00000466538 SLIT2O94813 1529 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 LCTP09848 1927 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 IGHV3-73A0A0B4J1V6 119 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 CLDN24A6NM45 220 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 MRASO14807 208 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 CHP2O43745 196 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 SERPINA1P01009 418 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 REG1AP05451 166 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 CST2P09228 141 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 CXCL3P19876 107 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 CSRP1P21291 193 aaKnown RBP1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 CRHBPP24387 322 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 BLVRBP30043 206 aaPredicted RBP1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 REG1BP48304 166 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 DAPP51397 102 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 RAB5BP61020 215 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 NAA20P61599 178 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 RPS24P62847 133 aaKnown RBP1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 HPCAP84074 193 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 HIST3H3Q16695 136 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 ZNF181Q2M3W8 571 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 FAM229BQ4G0N7 80 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 C1orf195Q5TG92 126 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 DHRS4L2Q6PKH6 230 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 OR6V1Q8N148 313 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 CLDN22Q8N7P3 220 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 ZNF676Q8N7Q3 588 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 PXT1Q8NFP0 134 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 OR10X1Q8NGY0 326 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 AP3S1Q92572 193 aa1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 NKX6-2Q9C056 277 aaPredicted RBP1.91□□□□□ -2.1
CDC42BPA-211ENST00000466538 SLC2A9Q9NRM0 540 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms