RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 C12orf77C9JDV5 145 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 SIRPB1O00241 398 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 SLC33A1O00400 549 aaPredicted RBP11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 RAB3DO95716 219 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 MT-ND4P03905 459 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 CD74P04233 296 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 CD3DP04234 171 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 FCGR3AP08637 254 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 MED14OSP0DP75 135 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 ERP29P30040 261 aaKnown RBP11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 P2RX3P56373 397 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 ARPC4P59998 168 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 PLET1Q6UQ28 207 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 MOB1BQ7L9L4 216 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 NRARPQ7Z6K4 114 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 ZNF491Q8N8L2 437 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 BEST4Q8NFU0 473 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 OR4C16Q8NGL9 310 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 OR5B12Q96R08 314 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 OR4C12Q96R67 309 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 TAS2R3Q9NYW6 316 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 MGAT4AQ9UM21 535 aa11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 AMMECR1Q9Y4X0 333 aaPredicted RBP11.31□□□□□ -0.6
HMGXB4-206ENST00000466438 MUC4Q99102 2169 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 TRGV10A0A0A0MS01 117 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 TRAV24A0A0B4J272 114 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 HSPB6O14558 160 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 MGST3O14880 152 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 DEDDO75618 318 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 HLA-DMAP28067 261 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 OR3A3P47888 321 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 RFX2P48378 723 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 SLURP1P55000 103 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 KIAA0141Q14154 515 aaPredicted RBP11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 TMEM17Q86X19 198 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 OR8H3Q8N146 312 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 GVQW1Q8N7I0 195 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 DUSP18Q8NEJ0 188 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 OR5H2Q8NGV7 314 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 OR4K15Q8NH41 348 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 PRRT1Q99946 306 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 NABP2Q9BQ15 211 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 TUBA4BQ9H853 241 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 ZNF581Q9P0T4 197 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 SCP2D1Q9UJQ7 156 aa11.3□□□□□ -0.6
HMGXB4-206ENST00000466438 TRBV6-6A0A0A6YYG2 114 aa11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 NCBP2LA6PVI3 153 aaKnown RBP11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 OR5H8P0DN80 308 aa11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 RAB7AP51149 207 aa11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 RBMS2Q15434 407 aaKnown RBP11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 FAM53AQ6NSI3 398 aaPredicted RBP11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 TMEM65Q6PI78 240 aa11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 Q6ZNX1 250 aa11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 Q6ZS49 121 aa11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 HAPLN4Q86UW8 402 aa11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 ARRDC1Q8N5I2 433 aa11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 Q8N9W7 124 aa11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 OR5AP2Q8NGF4 316 aa11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 OR9G1Q8NH87 305 aa11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 CORO2AQ92828 525 aa11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 SNAPC3Q92966 411 aa11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 HDHD3Q9BSH5 251 aaPredicted RBP11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 KLK15Q9H2R5 256 aa11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 ZNF580Q9UK33 172 aa11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 NUBP2Q9Y5Y2 271 aa11.29□□□□□ -0.6
HMGXB4-206ENST00000466438 TMEM30CPA0ZSE6 113 aa11.28□□□□□ -0.6
HMGXB4-206ENST00000466438 NUPR2A6NF83 97 aa11.28□□□□□ -0.6
HMGXB4-206ENST00000466438 NAPSAO96009 420 aa11.28□□□□□ -0.6
HMGXB4-206ENST00000466438 IGLV1-51P01701 117 aa11.28□□□□□ -0.6
HMGXB4-206ENST00000466438 IGF1P05019 195 aa11.28□□□□□ -0.6
HMGXB4-206ENST00000466438 CSN2P05814 226 aa11.28□□□□□ -0.6
HMGXB4-206ENST00000466438 FCER2P06734 321 aa11.28□□□□□ -0.6
HMGXB4-206ENST00000466438 BTCP35070 178 aa11.28□□□□□ -0.6
HMGXB4-206ENST00000466438 HRH1P35367 487 aa11.28□□□□□ -0.6
HMGXB4-206ENST00000466438 EBI3Q14213 229 aa11.28□□□□□ -0.6
HMGXB4-206ENST00000466438 UTF1Q5T230 341 aa11.28□□□□□ -0.6
HMGXB4-206ENST00000466438 SLC2A8Q9NY64 477 aa11.28□□□□□ -0.6
HMGXB4-206ENST00000466438 ANXA10Q9UJ72 324 aa11.28□□□□□ -0.6
HMGXB4-206ENST00000466438 FUOMA2VDF0 154 aa11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 LINC01619G3V211 115 aa11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 M0QYG6 137 aa11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 PAX5Q02548 391 aa11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 DIAPH2-AS1Q14236 149 aa11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 ATXN7L3Q14CW9 347 aaPredicted RBP11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 CDK10Q15131 360 aa11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 RSBN1Q5VWQ0 802 aaPredicted RBP11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 FAAP20Q6NZ36 180 aa11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 ZNF497Q6ZNH5 498 aa11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 Q8N6K4 173 aa11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 EAF1Q96JC9 268 aaPredicted RBP11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 HSPB9Q9BQS6 159 aa11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 Q9N2K0 584 aa11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 EHFQ9NZC4 300 aa11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 ZNF230Q9UIE0 474 aaPredicted RBP11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 KIAA2026Q5HYC2 2103 aa11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 PKHD1P08F94 4074 aa11.27□□□□□ -0.61
HMGXB4-206ENST00000466438 CXorf65A6NEN9 183 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 J3QL48 77 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 BRI3O95415 125 aa11.26□□□□□ -0.61
HMGXB4-206ENST00000466438 PMP2P02689 132 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms